logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000414_00778

You are here: Home > Sequence: MGYG000000414_00778

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp900546065
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp900546065
CAZyme ID MGYG000000414_00778
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
441 49923.01 7.2107
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000414 2648727 MAG Sweden Europe
Gene Location Start: 386467;  End: 387792  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000414_00778.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 81 431 1.1e-40 0.41356382978723405

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK10340 ebgA 1.52e-35 82 431 117 474
cryptic beta-D-galactosidase subunit alpha; Reviewed
COG3250 LacZ 2.56e-20 87 433 95 433
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
pfam02836 Glyco_hydro_2_C 1.01e-11 292 436 14 165
Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.
PRK09525 lacZ 3.18e-11 88 384 134 440
beta-galactosidase.
pfam02837 Glyco_hydro_2_N 2.75e-07 22 153 13 144
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBL14184.1 1.31e-121 3 441 2 435
BBL04653.1 1.85e-121 3 441 2 435
BBL07296.1 5.92e-121 1 441 1 427
AFL78889.1 6.31e-121 1 441 1 429
CBK63719.1 3.82e-119 1 441 1 427

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3DEC_A 6.07e-26 71 441 119 495
ChainA, Beta-galactosidase [Bacteroides thetaiotaomicron VPI-5482]
3DYO_A 5.20e-17 22 431 63 486
ChainA, Beta-galactosidase [Escherichia coli K-12],3DYO_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYO_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYO_D Chain D, Beta-galactosidase [Escherichia coli K-12],3DYP_A Chain A, Beta-galactosidase [Escherichia coli K-12],3DYP_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYP_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYP_D Chain D, Beta-galactosidase [Escherichia coli K-12]
3VD3_A 5.26e-17 22 431 92 515
E.coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_B E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_C E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD3_D E. coli (lacZ) beta-galactosidase (N460D) [Escherichia coli],3VD4_A E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_B E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_C E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli],3VD4_D E. coli (lacZ) beta-galactosidase (N460D) in complex with IPTG [Escherichia coli]
3DYM_A 6.92e-17 22 431 63 486
ChainA, Beta-galactosidase [Escherichia coli K-12],3DYM_B Chain B, Beta-galactosidase [Escherichia coli K-12],3DYM_C Chain C, Beta-galactosidase [Escherichia coli K-12],3DYM_D Chain D, Beta-galactosidase [Escherichia coli K-12],3E1F_1 Chain 1, Beta-galactosidase [Escherichia coli K-12],3E1F_2 Chain 2, Beta-galactosidase [Escherichia coli K-12],3E1F_3 Chain 3, Beta-galactosidase [Escherichia coli K-12],3E1F_4 Chain 4, Beta-galactosidase [Escherichia coli K-12]
1F4A_A 9.20e-17 22 431 61 484
E.COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_B E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_C E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4A_D E. COLI (LACZ) BETA-GALACTOSIDASE (NCS CONSTRAINED MONOMER-ORTHORHOMBIC) [Escherichia coli],1F4H_A E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_B E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_C E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli],1F4H_D E. COLI (LACZ) BETA-GALACTOSIDASE (ORTHORHOMBIC) [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O52847 4.53e-25 12 431 80 506
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q6D736 1.57e-22 22 431 72 497
Beta-galactosidase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=lacZ PE=3 SV=1
P06864 6.89e-20 88 433 123 476
Evolved beta-galactosidase subunit alpha OS=Escherichia coli (strain K12) OX=83333 GN=ebgA PE=1 SV=4
A1JTC4 6.95e-20 21 431 83 502
Beta-galactosidase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=lacZ PE=3 SV=1
P23989 2.18e-19 15 431 84 483
Beta-galactosidase OS=Streptococcus thermophilus OX=1308 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000243 0.999104 0.000184 0.000151 0.000149 0.000135

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000414_00778.