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CAZyme Information: MGYG000000415_01456

You are here: Home > Sequence: MGYG000000415_01456

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11471 sp900547555
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; UBA11471 sp900547555
CAZyme ID MGYG000000415_01456
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1155 MGYG000000415_6|CGC1 124436.29 4.3633
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000415 2630685 MAG Sweden Europe
Gene Location Start: 29454;  End: 32921  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000415_01456.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 77 257 2.3e-52 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 3.45e-11 448 535 3 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
COG3866 PelB 8.43e-09 8 283 3 299
Pectate lyase [Carbohydrate transport and metabolism].
smart00060 FN3 1.23e-08 448 522 3 81
Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
pfam00041 fn3 2.30e-06 449 523 3 81
Fibronectin type III domain.
pfam18884 TSP3_bac 4.93e-05 397 418 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCP72135.1 0.0 1 1153 4 1184
QCD38445.1 2.73e-258 1 626 4 652
QUT73817.1 8.02e-212 10 657 8 666
QUT74519.1 1.86e-190 1 633 1 634
QUT89622.1 2.36e-160 26 441 48 483

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.56e-133 22 439 16 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 5.33e-132 22 439 16 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
A1DPF0 5.51e-132 26 439 21 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q5B297 1.12e-131 26 439 20 410
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
Q4WL88 1.14e-130 26 439 21 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000321 0.998990 0.000196 0.000162 0.000157 0.000155

TMHMM  Annotations      download full data without filtering help

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