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CAZyme Information: MGYG000000415_01967
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | UBA11471 sp900547555 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA11471; UBA11471; UBA11471 sp900547555 | |||||||||||
| CAZyme ID | MGYG000000415_01967 | |||||||||||
| CAZy Family | PL1 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 25585; End: 27009 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| PL1 | 162 | 331 | 2.4e-41 | 0.7920792079207921 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| smart00656 | Amb_all | 2.29e-31 | 138 | 330 | 7 | 186 | Amb_all domain. |
| COG3866 | PelB | 3.84e-30 | 20 | 391 | 24 | 340 | Pectate lyase [Carbohydrate transport and metabolism]. |
| pfam00544 | Pec_lyase_C | 1.95e-14 | 176 | 330 | 52 | 211 | Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ADE83376.1 | 1.69e-121 | 28 | 394 | 46 | 421 |
| QVJ81552.1 | 1.92e-120 | 28 | 394 | 46 | 421 |
| AAW84045.1 | 1.09e-113 | 65 | 398 | 1 | 328 |
| AHJ96631.1 | 3.76e-47 | 121 | 394 | 79 | 364 |
| ABG58437.1 | 4.69e-47 | 159 | 414 | 86 | 356 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3ZSC_A | 5.45e-18 | 143 | 306 | 51 | 213 | Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima] |
| 1VBL_A | 7.90e-18 | 174 | 331 | 146 | 331 | Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47] |
| 3KRG_A | 1.37e-14 | 184 | 391 | 150 | 394 | ChainA, Pectate lyase [Bacillus subtilis] |
| 5AMV_A | 1.04e-13 | 184 | 391 | 150 | 394 | Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168] |
| 1BN8_A | 1.15e-13 | 184 | 391 | 171 | 415 | BacillusSubtilis Pectate Lyase [Bacillus subtilis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A2QV36 | 3.16e-22 | 180 | 394 | 114 | 321 | Probable pectate lyase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=plyA PE=3 SV=1 |
| Q9C2Z0 | 3.16e-22 | 180 | 394 | 114 | 321 | Pectate lyase A OS=Aspergillus niger OX=5061 GN=plyA PE=1 SV=1 |
| Q9WYR4 | 2.68e-21 | 143 | 306 | 78 | 240 | Pectate trisaccharide-lyase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=pelA PE=1 SV=1 |
| B1L969 | 8.79e-21 | 143 | 306 | 76 | 238 | Pectate trisaccharide-lyase OS=Thermotoga sp. (strain RQ2) OX=126740 GN=pelA PE=3 SV=1 |
| Q2U8R6 | 3.05e-20 | 180 | 394 | 112 | 319 | Probable pectate lyase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000328 | 0.998792 | 0.000331 | 0.000182 | 0.000168 | 0.000160 |