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CAZyme Information: MGYG000000437_00126

You are here: Home > Sequence: MGYG000000437_00126

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp001941065
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp001941065
CAZyme ID MGYG000000437_00126
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase B
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
615 MGYG000000437_2|CGC1 68866.98 7.2874
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000437 3341375 MAG Sweden Europe
Gene Location Start: 33784;  End: 35631  Strand: -

Full Sequence      Download help

MNRQIHLIAL  LLFAVASAFQ  PYAANAARRT  VRVADYGLQP  GSGQDALPVI  RRIIAENKGV60
RGLQICFDKG  RYDFYPDAER  QAAGKPTTAF  ALTRTEGVEI  DGGGCDWIFH  GLMNPVRLSE120
CRGTTLRNVR  IDWQQPYNSQ  ATIVSATDTY  LDMAIDAERY  PYAVASDSLA  FVGEYGLQRI180
VPEYTNLYDA  TTHELLYQTR  DVPLGRDMFR  ARVTDLGNNR  VRFHYRPAMK  PAPGTIVVFF240
HGRYITNGIE  IADCRQTRIE  QVTIHHTLSC  GVFGVRSHDI  SMIGLDIVAD  ERSGRVFSTI300
ADATHFIGCT  GDILFDGCTV  SGSGDDFTNV  HGMYAPVAEV  CGERSVRITP  TSRDQGFRPG360
ERVWPLDTAT  MQRGRPLTAA  GTERIEGTRD  CLLHFREPIA  GRIAAGNILE  NATLCPRLTV420
RNCRMLKQNR  GRSILVTTPA  KILIENNYFR  SAGAAILIEG  DTDLWFESGA  VCDVTIRNNL480
FEDCYTSGNN  IIDGPWGWGE  AVISVSPSFR  PQDADAKAYH  RNIRIEGNTF  RHFDYAVLFA540
RSVEGLEFSR  NRLERTRTFE  PFYRPYNLFL  DGCRKVRIEH  NSFGPDFPGH  NIGIEHMRPS600
EIVQRGSQPL  EIICK615

Enzyme Prediction      help

No EC number prediction in MGYG000000437_00126.

CAZyme Signature Domains help

Created with Snap30619212315318421524627630733836939943046149252255358431581GH110
Family Start End Evalue family coverage
GH110 31 581 3.4e-131 0.9963503649635036

CDD Domains      download full data without filtering help

Created with Snap306192123153184215246276307338369399430461492522553584419554Beta_helix415551Beta_helix
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 7.11e-04 419 554 12 135
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam13229 Beta_helix 0.010 415 551 31 156
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Created with Snap30619212315318421524627630733836939943046149252255358429602QUT74399.1|GH11024602BCI63973.1|GH11031602AHF13562.1|GH11030602AFL77293.1|GH11026602QUT42152.1|GH110
Hit ID E-Value Query Start Query End Hit Start Hit End
QUT74399.1 1.35e-141 29 602 24 607
BCI63973.1 1.72e-141 24 602 19 605
AHF13562.1 2.06e-134 31 602 14 586
AFL77293.1 6.14e-130 30 602 27 601
QUT42152.1 1.84e-102 26 602 23 603

PDB Hits      download full data without filtering help

Created with Snap306192123153184215246276307338369399430461492522553584295677JW4_A295677JWF_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 7.68e-73 29 567 26 579
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 4.03e-72 29 567 26 579
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Created with Snap30619212315318421524627630733836939943046149252255358426602sp|Q89ZX0|GLAB_BACTN17602sp|Q5L7M8|GLAA_BACFN17602sp|Q64MU6|GLAA_BACFR26559sp|B1KD83|GLAA_SHEWM31585sp|B2UNU8|GLAB_AKKM8
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q89ZX0 3.67e-103 26 602 23 603
Alpha-1,3-galactosidase B OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaB PE=3 SV=1
Q5L7M8 3.17e-70 17 602 10 600
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
Q64MU6 1.21e-68 17 602 10 600
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1
B1KD83 1.79e-68 26 559 28 557
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1
B2UNU8 5.29e-63 31 585 219 771
Alpha-1,3-galactosidase B OS=Akkermansia muciniphila (strain ATCC BAA-835 / DSM 22959 / JCM 33894 / BCRC 81048 / CCUG 64013 / CIP 107961 / Muc) OX=349741 GN=glaB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000294 0.999102 0.000148 0.000162 0.000144 0.000139

TMHMM  Annotations      download full data without filtering help

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