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CAZyme Information: MGYG000000437_00256

You are here: Home > Sequence: MGYG000000437_00256

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Alistipes sp001941065
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; Alistipes sp001941065
CAZyme ID MGYG000000437_00256
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
876 MGYG000000437_4|CGC3 98012.51 5.8163
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000437 3341375 MAG Sweden Europe
Gene Location Start: 67581;  End: 70211  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000437_00256.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 528 798 7e-61 0.8316831683168316
GH28 137 477 3e-48 0.916923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.11e-60 30 492 4 495
Polygalacturonase [Carbohydrate transport and metabolism].
pfam02156 Glyco_hydro_26 4.16e-36 528 759 2 230
Glycosyl hydrolase family 26.
COG4124 ManB2 3.41e-17 625 759 120 256
Beta-mannanase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 3.58e-15 244 444 109 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN02188 PLN02188 8.80e-11 111 493 36 367
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AFN73753.1 3.76e-102 525 860 36 366
ARK08556.1 1.89e-95 526 860 25 361
AFD07539.1 2.43e-95 526 874 50 401
QIK56190.1 4.88e-93 526 860 24 360
QCQ53806.1 2.08e-92 526 862 32 361

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6Q78_A 3.38e-73 526 862 57 405
Thestructure of GH26C from Muricauda sp. MAR_2010_75 [Muricauda sp. MAR_2010_75],6Q78_B The structure of GH26C from Muricauda sp. MAR_2010_75 [Muricauda sp. MAR_2010_75]
2VX5_A 4.73e-71 503 860 7 386
CellvibrioJaponicus Mannanase Cjman26c Mannose-Bound Form [Cellvibrio japonicus]
2VX4_A 4.73e-71 503 860 7 386
CellvibrioJaponicus Mannanase Cjman26c Native Form [Cellvibrio japonicus],2VX6_A CELLVIBRIO JAPONICUS MANNANASE CJMAN26C Gal1Man4-BOUND FORM [Cellvibrio japonicus]
4CD4_A 8.98e-71 503 860 30 409
Thestructure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManIFG [Cellvibrio japonicus Ueda107],4CD5_A The structure of GH26 beta-mannanase CjMan26C from Cellvibrio japonicus in complex with ManMIm [Cellvibrio japonicus Ueda107]
2VX7_A 3.35e-70 503 860 7 386
CellvibrioJaponicus Mannanase Cjman26c Mannobiose-Bound Form [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P49424 4.31e-46 525 836 48 366
Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=manA PE=1 SV=2
A1A278 4.23e-43 526 862 42 395
Mannan endo-1,4-beta-mannosidase OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) OX=367928 GN=BAD_1030 PE=1 SV=1
P15922 3.24e-36 5 517 15 602
Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1
A7PZL3 3.38e-23 116 473 67 424
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
G2Q4H7 2.28e-18 511 759 155 394
Mannan endo-1,4-beta-mannosidase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Man26A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000615 0.998625 0.000253 0.000179 0.000160 0.000152

TMHMM  Annotations      download full data without filtering help

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