logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000441_00643

You are here: Home > Sequence: MGYG000000441_00643

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp900545705
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900545705
CAZyme ID MGYG000000441_00643
CAZy Family GH10
CAZyme Description Anti-sigma-I factor RsgI6
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
498 MGYG000000441_4|CGC1 58546.59 8.5699
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000441 2454454 MAG Sweden Europe
Gene Location Start: 7928;  End: 9424  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000441_00643.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 131 435 1.9e-37 0.8943894389438944

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 4.18e-28 149 413 3 238
Glycosyl hydrolase family 10.
COG3693 XynA 3.55e-24 149 412 69 305
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 1.50e-18 149 413 46 279
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMW04636.1 6.54e-120 47 489 20 450
QHV94149.1 2.25e-99 56 493 26 442
QIP12711.1 2.51e-98 56 493 26 442
AEI51978.1 5.08e-97 56 493 26 438
QMW04637.1 3.20e-96 56 488 26 437

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7D88_A 3.56e-21 58 467 41 393
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
7D89_A 1.22e-19 58 467 41 393
ChainA, Beta-xylanase [Bacillus sp. (in: Bacteria)]
1TA3_B 1.59e-08 177 330 66 209
CrystalStructure of xylanase (GH10) in complex with inhibitor (XIP) [Aspergillus nidulans]
3EMC_A 1.39e-07 177 411 64 294
Crystalstructure of XynB, an intracellular xylanase from Paenibacillus barcinonensis [Paenibacillus barcinonensis],3EMQ_A Crystal structure of xilanase XynB from Paenibacillus barcelonensis complexed with an inhibitor [Paenibacillus barcinonensis],3EMZ_A Crystal structure of xylanase XynB from Paenibacillus barcinonensis complexed with a conduramine derivative [Paenibacillus barcinonensis]
1XAS_A 2.09e-06 152 338 52 216
CRYSTALSTRUCTURE, AT 2.6 ANGSTROMS RESOLUTION, OF THE STREPTOMYCES LIVIDANS XYLANASE A, A MEMBER OF THE F FAMILY OF BETA-1,4-D-GLYCANSES [Streptomyces lividans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DH97 7.34e-19 55 485 379 747
Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
A0A1P8B8F8 1.18e-09 149 467 250 533
Endo-1,4-beta-xylanase 5 OS=Arabidopsis thaliana OX=3702 GN=XYN5 PE=3 SV=1
Q84WT5 2.07e-09 177 467 266 534
Endo-1,4-beta-xylanase 5-like OS=Arabidopsis thaliana OX=3702 GN=At4g33820 PE=2 SV=1
P40944 7.06e-09 177 369 415 599
Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor sp. (strain Rt8B.4) OX=28238 GN=xynA PE=3 SV=1
Q00177 1.00e-07 177 330 90 233
Endo-1,4-beta-xylanase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xlnC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000754 0.998138 0.000517 0.000197 0.000184 0.000176

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000441_00643.