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CAZyme Information: MGYG000000442_00447

You are here: Home > Sequence: MGYG000000442_00447

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-462 sp003489705
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-462; CAG-462 sp003489705
CAZyme ID MGYG000000442_00447
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
503 MGYG000000442_4|CGC1 54226.87 7.4674
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000442 3125088 MAG Sweden Europe
Gene Location Start: 17746;  End: 19257  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000442_00447.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 86 270 1.9e-74 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.14e-09 69 348 65 330
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 2.35e-07 80 270 3 186
Amb_all domain.
pfam00544 Pec_lyase_C 4.56e-06 121 227 55 175
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
pfam18884 TSP3_bac 3.75e-04 450 471 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT93111.1 5.75e-239 13 496 17 512
ALJ61309.1 1.90e-238 13 496 21 516
QDO69223.1 6.51e-231 20 492 24 508
QUT77823.1 7.36e-224 30 492 48 512
QUT75603.1 2.14e-215 16 492 2 482

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.01e-47 30 490 17 409
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 7.27e-46 30 490 17 409
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
B0XMA2 3.74e-43 20 490 8 410
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 3.74e-43 20 490 8 410
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 7.02e-42 20 490 8 410
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000312 0.998915 0.000221 0.000183 0.000179 0.000165

TMHMM  Annotations      download full data without filtering help

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