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CAZyme Information: MGYG000000442_01843

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-462 sp003489705
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-462; CAG-462 sp003489705
CAZyme ID MGYG000000442_01843
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
575 MGYG000000442_21|CGC2 64078.04 6.9253
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000442 3125088 MAG Sweden Europe
Gene Location Start: 39448;  End: 41175  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000442_01843.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 273 545 6.2e-98 0.9444444444444444
CE12 27 257 2.3e-80 0.9952380952380953

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 8.68e-88 26 257 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN02773 PLN02773 1.67e-75 275 545 9 284
pfam01095 Pectinesterase 1.84e-69 272 531 1 266
PLN02682 PLN02682 1.06e-64 271 545 69 349
pectinesterase family protein
PLN02432 PLN02432 5.28e-63 275 545 15 274
putative pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADY37158.1 8.61e-315 2 575 3 574
QEW38148.1 8.07e-311 1 571 1 570
ALK82851.1 2.31e-310 1 571 1 570
AII65135.1 5.41e-309 1 571 1 570
AII67884.1 7.67e-309 1 571 1 570

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 5.62e-42 274 539 10 281
Pectinmethylesterase from Carrot [Daucus carota]
1XG2_A 9.49e-40 274 539 6 277
ChainA, Pectinesterase 1 [Solanum lycopersicum]
2NSP_A 2.04e-33 271 531 4 311
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A 3.83e-32 271 516 31 312
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
5C1E_A 1.40e-29 281 531 17 266
CrystalStructure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9LVQ0 1.10e-52 275 545 9 284
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q8VYZ3 2.24e-46 277 545 90 363
Probable pectinesterase 53 OS=Arabidopsis thaliana OX=3702 GN=PME53 PE=2 SV=1
Q9SIJ9 2.00e-44 275 563 53 334
Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1
P41510 6.09e-44 274 544 274 553
Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus OX=3708 GN=BP19 PE=2 SV=1
Q42608 1.80e-43 274 544 261 540
Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris OX=3711 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

0.010700 0.414969 0.573623 0.000232 0.000233 0.000228

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000442_01843.