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CAZyme Information: MGYG000000444_01794

You are here: Home > Sequence: MGYG000000444_01794

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Borkfalkia ceftriaxoniphila
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; Borkfalkia; Borkfalkia ceftriaxoniphila
CAZyme ID MGYG000000444_01794
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1029 MGYG000000444_51|CGC1 113232.37 4.5976
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000444 2535942 MAG Sweden Europe
Gene Location Start: 13494;  End: 16583  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000444_01794.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 350 560 6.3e-21 0.5107692307692308

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 7.32e-27 289 554 77 337
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 1.39e-08 294 562 67 336
polygalacturonase ADPG
pfam12708 Pectate_lyase_3 5.26e-05 295 330 2 37
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QGA23464.1 5.43e-128 47 778 80 805
QCD41820.1 2.38e-86 86 711 248 871
ADB48561.1 2.32e-36 285 774 20 495
QGQ94767.1 1.42e-28 281 767 25 507
ADB48560.1 3.64e-25 285 748 20 476

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5OLP_A 7.47e-11 288 563 38 307
Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482]
3JUR_A 6.40e-09 289 532 22 276
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]
4MXN_A 2.63e-07 296 416 23 119
Crystalstructure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_B Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_C Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184],4MXN_D Crystal structure of a putative glycosyl hydrolase (PARMER_00599) from Parabacteroides merdae ATCC 43184 at 1.95 A resolution [Parabacteroides merdae ATCC 43184]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8RY29 4.13e-07 294 562 67 336
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.238003 0.713211 0.046379 0.000949 0.000587 0.000867

TMHMM  Annotations      download full data without filtering help

start end
9 31
998 1020