CAZyme Information: MGYG000000454_00813

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; RUG11130
• CAZyme ID: MGYG000000454_00813
• CAZy Family: GH4
• CAZyme Description: Alpha-galactosidase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
439		49766.99	5.2338

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000454	1064846	MAG	Sweden	Europe

• Gene Location: Start: 54; End: 1373 Strand: -

Full Sequence      

MKLTFMGAGSTVFAKNVIGDTMLADPFHDVEVALYDIDEERLNESYILIDAMNKTVNGGR
AKIEKFLGVPQRKAALKGADFVVNAIQVGLYDPCTLIDFEVPKKYGLYQTIGDTLGVGGI
FRGMRTIHVLKEFFADMEEVCPDAWFLNYTNPMAILSGYIQRFTPIKSVGLCHSVQCCSK
ELLEKLGMEDKLEGRYERIAGINHMAWLLEIRDRDGNDLYPEIRRRAKKSSQEEYHRDLV
RFDYIDKFGYYCTESSIHNSEYNPFYLKPGREDLMKKFNTNYDEYPKRCRDQIADWKRQR
DEILNGGKVEHTRSKEYASYIMEAMTTDVPYIIGGNVINRGMIPNLPFDACVEVPCLINK
NGVTPTYAGPLPLQLAAMNSSNIYPQMLTIEAAVTGKRETLYQAAMMDPHTGAVLSTDEI
VSLCDDLIEAHTNAGYPIF

Enzyme Prediction     

No EC number prediction in MGYG000000454_00813.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH4	2	184	2.5e-61	0.9832402234636871

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd05297	GH4_alpha_glucosidase_galactosidase	0.0	1	428	1	423	Glycoside Hydrolases Family 4; Alpha-glucosidases and alpha-galactosidases. linked to 3D####ucture
PRK15076	PRK15076	0.0	1	431	2	423	alpha-galactosidase; Provisional
COG1486	CelF	3.40e-156	1	431	4	432	Alpha-galactosidase/6-phospho-beta-glucosidase, family 4 of glycosyl hydrolase [Carbohydrate transport and metabolism].
pfam02056	Glyco_hydro_4	3.80e-64	2	188	1	183	Family 4 glycosyl hydrolase.
cd05296	GH4_P_beta_glucosidase	4.56e-62	1	431	1	415	Glycoside Hydrolases Family 4; Phospho-beta-glucosidase. Some bacteria simultaneously translocate and phosphorylate disaccharides via the phosphoenolpyruvate-dependent phosphotransferase system (PEP-PTS). After translocation, these phospho-disaccharides may be hydrolyzed by the GH4 glycoside hydrolases such as the phospho-beta-glucosidases. Other organisms (such as archaea and Thermotoga maritima ) lack the PEP-PTS system, but have several enzymes normally associated with the PEP-PTS operon. The 6-phospho-beta-glucosidase from Thermotoga maritima hydrolylzes cellobiose 6-phosphate (6P) into glucose-6P and glucose, in an NAD+ and Mn2+ dependent fashion. The Escherichia coli 6-phospho-beta-glucosidase (also called celF) hydrolyzes a variety of phospho-beta-glucosides including cellobiose-6P, salicin-6P, arbutin-6P, and gentobiose-6P. Phospho-beta-glucosidases are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVK48341.1	2.55e-215	1	431	1	432
QES75385.1	2.55e-215	1	431	1	432
AJH01412.1	7.29e-215	1	431	1	432
AQS07214.1	7.29e-215	1	431	1	432
CUU50321.1	1.52e-214	1	431	1	432

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3FEF_A	2.44e-42	1	409	6	419	Crystalstructure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_B Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_C Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis],3FEF_D Crystal structure of putative glucosidase lplD from bacillus subtilis [Bacillus subtilis]
1U8X_X	1.47e-36	2	431	30	457	CrystalStructure Of Glva From Bacillus Subtilis, A Metal-requiring, Nad-dependent 6-phospho-alpha-glucosidase [Bacillus subtilis]
5C3M_A	8.40e-34	1	431	5	430	Crystalstructure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_B Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_C Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus],5C3M_D Crystal structure of Gan4C, a GH4 6-phospho-glucosidase from Geobacillus stearothermophilus [Geobacillus stearothermophilus]
6DUX_A	1.16e-30	2	431	8	435	ChainA, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DUX_B Chain B, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DVV_A Chain A, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae],6DVV_B Chain B, 6-phospho-alpha-glucosidase [Klebsiella pneumoniae]
1S6Y_A	1.73e-30	1	431	8	433	2.3Acrystal structure of phospho-beta-glucosidase [Geobacillus stearothermophilus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
O34645	1.63e-174	2	431	3	424	Alpha-galactosidase OS=Bacillus subtilis (strain 168) OX=224308 GN=melA PE=1 SV=1
P06720	2.05e-129	2	431	6	441	Alpha-galactosidase OS=Escherichia coli (strain K12) OX=83333 GN=melA PE=1 SV=1
P30877	1.65e-128	2	431	6	441	Alpha-galactosidase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=melA PE=3 SV=2
Q9X4Y0	2.07e-59	2	430	5	434	Alpha-galactosidase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=melA PE=3 SV=1
D3T426	9.90e-49	1	418	11	434	Alpha-galacturonidase OS=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) OX=580331 GN=Thit_1733 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000070	0.000002	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000454_00813.