logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000470_00414

You are here: Home > Sequence: MGYG000000470_00414

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Brachyspira pilosicoli
Lineage Bacteria; Spirochaetota; Brachyspirae; Brachyspirales; Brachyspiraceae; Brachyspira; Brachyspira pilosicoli
CAZyme ID MGYG000000470_00414
CAZy Family GH19
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
192 MGYG000000470_7|CGC1 22381.88 9.7199
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000470 2694868 MAG Fiji Oceania
Gene Location Start: 23864;  End: 24442  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000470_00414.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH19 31 156 8.3e-28 0.43722943722943725

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3179 COG3179 3.64e-49 16 189 22 200
Predicted chitinase [General function prediction only].
pfam00182 Glyco_hydro_19 3.35e-06 105 138 104 137
Chitinase class I.
cd00325 chitinase_GH19 9.66e-06 34 189 47 210
Glycoside hydrolase family 19, chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Glycoside hydrolase family 19 chitinases are found primarily in plants (classes I, III, and IV), but some are found in bacteria. Class I and II chitinases are similar in their catalytic domains. Class I chitinases have an N-terminal cysteine-rich, chitin-binding domain which is separated from the catalytic domain by a proline and glycine-rich hinge region. Class II chitinases lack both the chitin-binding domain and the hinge region. Class IV chitinases are similar to class I chitinases, but they are smaller in size due to certain deletions. Despite lacking any significant sequence homology with lysozymes, structural analysis reveals that family 19 chitinases, together with family 46 chitosanases, are similar to several lysozymes including those from T4-phage and from goose. The structures reveal that the different enzyme groups arose from a common ancestor glycohydrolase antecedent to the prokaryotic/eukaryotic divergence.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACH69283.1 1.37e-135 1 192 1 192
ADK31203.1 1.37e-135 1 192 1 192
AGA66994.1 3.23e-134 1 192 1 192
CCG58107.1 6.52e-134 1 192 1 192
AFR72009.1 2.65e-133 1 192 1 192

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4OK7_A 4.10e-26 1 186 15 215
ChainA, Endolysin [Salmonella phage SPN1S],4OK7_B Chain B, Endolysin [Salmonella phage SPN1S],4OK7_C Chain C, Endolysin [Salmonella phage SPN1S]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P44187 3.91e-28 38 189 42 194
Glycosyl hydrolase family 19 domain-containing protein HI_1415 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1415 PE=3 SV=1
P29021 2.83e-06 97 155 111 168
Acidic endochitinase OS=Petunia hybrida OX=4102 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000033 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000470_00414.