CAZyme Information: MGYG000000476_00694

Basic Information

• Species: UMGS882 sp900546385
• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-382; UMGS882; UMGS882 sp900546385
• CAZyme ID: MGYG000000476_00694
• CAZy Family: CBM67
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1736	MGYG000000476_4|CGC2	193156.45	4.6001

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000476	2809926	MAG	Fiji	Oceania

• Gene Location: Start: 100879; End: 106089 Strand: -

Full Sequence      

MKKRHITLLLAFVLCFSLFAVGVSAVSYNGSSTPLMETTTGEYGKLIWKQDFEGAASIGD
YRYDIGYVSPYAADGATLSDTSLIWTGDGDGTNPTFTIVDNPVGDGKVLSMLGKTTYPIY
RLNFGREKDIISKPGKYTLVVHAYDGGKGYAANCRFLINRCYDGAPEAGAIRFGSDSFKK
NAYTFTICTKEEFQATSLTETSYTNSNVFALQYVYLFMMGGNGKTCYFDNIELWYDEYAD
ITFHTEAKNDGMAKDLETLFPNTHKSYLPGAALPNLSVPGSGYRFIGWSKAKDDASQIVT
EAEAGLYDLYAIYEDANGDDLAGLETYMTPYEMILLAARLHAVLSGNTAELPEGAAFADY
LAYAEKYALLPSSGFGDYTRAITRGEAAEMFYNALPADGLTAINTIKSIPDIEDYQGFYE
AVYALYRSGILGGVNSRGFFRPYEVLLRIDYETLVSRVADPEERVRQTLEEAILDKAGTI
QLEKNTQKTFDAAFISAPESYLATLEEMPSYTLPLGEWIGPTEYTRYYLQRKINISKTVS
KAEIEFQSSLPIDLFIGNTQIPTEKVNGWHLTGVKDVTSALASGTNFINVRGFLSDNTMH
FLAGVRGCLSVTYTDGTTENFDTSNGFTNSAMGGFWANSEQEGWQTTTLSGTRRIHKTKL
HPRLRTRAMYMRSGFLAEKEIKKATLYATAQGLYVPYLNGERVTDARFLPGSMQYLTEYQ
VFDVTEFVHTGKNIIGAELASGFNNSESWGAFYNNIPSLMMQLEIEYTDGTSLVIGTNKN
WQVTASPRVENDIQFGERYDARLETADWCSDLNAGSWVSAEEHSVTGKTLSQEHYEPVRI
NNEMTAKTIFTLADGSTCYDFGLNSTGRVKLILRNTKPGEQILIRYCESLNGSETLGYTA
NVSEYGDVFFYKDTYADGRACYGARNIDTYICKGAEEEVYIPEFTFTGFRYIYVSGYSGT
YDISTVKKVEMYNDLDVTGDFETSHTGLAKVWDAVKRSYRSNIVTGPMDCPTREKNFWNG
DMQVFINTACWYMDNNRFLERWTESGRKMGGDYTYGWGDEDYIVPLTLYKFYGNTDVIAS
KYAKIKTLINYRRNQVASGDVLPSKGTYTYGDHQAPSRVSDEFFCNVYYTLMYKRAAEMA
EILGKTDEAAGYLAEYEKARVAFNNKYYLAGENDYSSKNQSGLVYALAFEFADPENREAL
AAKLHEYVAASGYHFTTSFMSTEYILSVLCDYGYEDDAYRLVTQTTYPSLINMVETSGGG
TVTESWKGTVGTGDSINHYSIGNAARWFFEYLGGIKVAKPGFDEITVKPYFFKDLKDIDV
TYKSAHGLIESAWSYQKNDKTFIWNVTIPNGITATLALPESMKRESGDNLGTVGGGSYTI
VVAENKAPDTRPVLIYADGESGKGALVGHGNFGIIADPNDKDNLCYSNIPKNDDKTWLYV
DHATTYKPGYTYSVECDVMIASSGTTNVIGQNFKAEILCNVPYADSTGAKKDHVVARTGK
ISANGQWTHWAFEFTIPEDSLVRTYDQFRFYTDPVGEKGVGYLFDNLIVRENPLPDTRKI
VFQADADNTTFDFYGWKSVTSVDTDPNNEVNKCYKTLPENDTESIYTSSTCRITVKPGYT
YSVDCDVMLASSGTSEAIDSGFTGVVQFNMQYKDAGGTNRDHIVGSSGKITANGEWKHVS
FDFTVAADATESATDQFILYSDPVSGKGVGFRFDNLIVRENEPTDSESVINSDLIA

Enzyme Prediction     

No EC number prediction in MGYG000000476_00694.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	849	1358	2.1e-118	0.998015873015873
CBM67	664	827	6.3e-29	0.9090909090909091

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	3.09e-58	978	1292	3	340	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam08531	Bac_rhamnosid_N	2.52e-39	679	840	1	170	Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam05592	Bac_rhamnosid	1.67e-13	851	972	2	102	Bacterial alpha-L-rhamnosidase concanavalin-like domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam17390	Bac_rhamnosid_C	4.48e-13	1294	1368	1	73	Bacterial alpha-L-rhamnosidase C-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
pfam02018	CBM_4_9	0.003	1613	1690	57	122	Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QGQ94338.1	5.85e-153	494	1359	101	974
AFC29030.1	1.82e-96	670	1375	138	859
AEI40411.1	1.24e-95	670	1375	138	859
AFH61241.1	9.88e-95	670	1375	121	842
ANE46371.1	3.31e-93	668	1375	134	859

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3W5M_A	2.81e-90	490	1382	118	1030	CrystalStructure of Streptomyces avermitilis alpha-L-rhamnosidase [Streptomyces avermitilis MA-4680 = NBRC 14893],3W5N_A Crystal Structure of Streptomyces avermitilis alpha-L-rhamnosidase complexed with L-rhamnose [Streptomyces avermitilis MA-4680 = NBRC 14893]
6I60_A	1.75e-77	668	1370	176	913	Structureof alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12],6I60_B Structure of alpha-L-rhamnosidase from Dictyoglumus thermophilum [Dictyoglomus thermophilum H-6-12]
6GSZ_A	3.87e-68	667	1359	130	847	Crystalstructure of native alfa-L-rhamnosidase from Aspergillus terreus [Aspergillus terreus]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q82PP4	1.26e-89	490	1382	118	1030	Alpha-L-rhamnosidase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=SAVERM_828 PE=1 SV=1
T2KNB2	1.58e-72	667	1386	173	907	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22090 PE=1 SV=2
P9WF03	1.09e-61	670	1359	172	879	Alpha-L-rhamnosidase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_34 PE=1 SV=1
T2KPL4	3.63e-61	668	1415	184	948	Alpha-L-rhamnosidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22170 PE=2 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000278	0.998962	0.000190	0.000192	0.000174	0.000162

TMHMM  Annotations     

start	end
7	29