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CAZyme Information: MGYG000000479_00556

You are here: Home > Sequence: MGYG000000479_00556

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Treponema_D sp900541995
Lineage Bacteria; Spirochaetota; Spirochaetia; Treponematales; Treponemataceae; Treponema_D; Treponema_D sp900541995
CAZyme ID MGYG000000479_00556
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
409 MGYG000000479_3|CGC1 44286.81 6.8493
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000479 2347794 MAG Fiji Oceania
Gene Location Start: 5381;  End: 6610  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000479_00556.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 103 319 5.2e-39 0.9444444444444444

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00933 Glyco_hydro_3 4.68e-48 41 341 7 309
Glycosyl hydrolase family 3 N terminal domain.
COG1472 BglX 5.69e-48 40 367 7 322
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
PRK05337 PRK05337 1.59e-33 64 320 24 279
beta-hexosaminidase; Provisional
PRK15098 PRK15098 0.005 223 319 225 319
beta-glucosidase BglX.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQA00274.1 2.70e-278 1 409 1 409
AEE17330.1 2.55e-115 25 378 64 419
AEB13960.1 1.67e-113 11 364 8 359
QTQ11429.1 1.87e-106 15 401 46 452
QTQ16630.1 1.87e-106 15 401 46 452

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3BMX_A 4.66e-34 49 367 62 403
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 1.88e-33 49 367 36 377
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 2.23e-33 49 367 66 407
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]
4ZM6_A 1.74e-31 68 321 40 299
Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]
7VI6_A 3.93e-31 45 320 5 276
ChainA, Beta-N-acetylhexosaminidase [Akkermansia muciniphila ATCC BAA-835],7VI6_B Chain B, Beta-N-acetylhexosaminidase [Akkermansia muciniphila ATCC BAA-835],7VI7_A Chain A, Beta-N-acetylhexosaminidase [Akkermansia muciniphila ATCC BAA-835],7VI7_B Chain B, Beta-N-acetylhexosaminidase [Akkermansia muciniphila ATCC BAA-835]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40406 2.55e-33 49 367 62 403
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823 8.01e-30 68 357 65 380
Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
P44955 3.13e-24 45 332 5 289
Beta-hexosaminidase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=nagZ PE=3 SV=1
A5UDA9 2.03e-23 45 324 5 282
Beta-hexosaminidase OS=Haemophilus influenzae (strain PittEE) OX=374930 GN=nagZ PE=3 SV=1
Q4QLU8 2.06e-23 45 332 5 289
Beta-hexosaminidase OS=Haemophilus influenzae (strain 86-028NP) OX=281310 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000221 0.999141 0.000158 0.000161 0.000147 0.000139

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000479_00556.