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CAZyme Information: MGYG000000480_00244

You are here: Home > Sequence: MGYG000000480_00244

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp900546565
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900546565
CAZyme ID MGYG000000480_00244
CAZy Family GH110
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
650 73756.14 8.4976
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000480 1940095 MAG Fiji Oceania
Gene Location Start: 53525;  End: 55477  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000480_00244.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 60 607 1.6e-49 0.9963503649635036

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 5.54e-06 434 579 1 111
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44429.1 4.14e-140 40 637 182 768
AVM44109.1 3.27e-135 40 637 223 805
AVM44539.1 8.84e-115 26 637 168 763
AVM46987.1 7.19e-85 40 635 146 743
AZM48752.1 1.23e-83 40 636 39 619

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 2.96e-14 56 608 24 597
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 1.19e-13 56 608 24 597
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1KD83 3.67e-13 60 628 33 600
Alpha-1,3-galactosidase A OS=Shewanella woodyi (strain ATCC 51908 / MS32) OX=392500 GN=glaA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000298 0.998972 0.000196 0.000173 0.000174 0.000159

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000480_00244.