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CAZyme Information: MGYG000000480_00361
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-312 sp900546565 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900546565 | |||||||||||
| CAZyme ID | MGYG000000480_00361 | |||||||||||
| CAZy Family | GH142 | |||||||||||
| CAZyme Description | Beta-L-arabinobiosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 23222; End: 24865 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH142 | 50 | 538 | 3.5e-156 | 0.9916492693110647 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam17389 | Bac_rhamnosid6H | 3.73e-05 | 117 | 290 | 41 | 221 | Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria. |
| COG3408 | GDB1 | 4.27e-04 | 250 | 382 | 429 | 551 | Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CUA19757.1 | 5.22e-164 | 48 | 544 | 36 | 529 |
| CBW23799.1 | 5.96e-163 | 48 | 544 | 36 | 529 |
| QUU04108.1 | 1.20e-162 | 48 | 544 | 36 | 529 |
| QRP88912.1 | 1.20e-162 | 48 | 544 | 36 | 529 |
| QCQ42889.1 | 1.20e-162 | 48 | 544 | 36 | 529 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5MQS_A | 2.17e-97 | 51 | 537 | 633 | 1096 | SialidaseBT_1020 [Bacteroides thetaiotaomicron] |
| 5MQR_A | 2.00e-92 | 51 | 537 | 633 | 1096 | SialidaseBT_1020 [Bacteroides thetaiotaomicron] |
| 6M5A_A | 3.35e-25 | 59 | 538 | 284 | 805 | Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E8MGH9 | 2.66e-24 | 59 | 538 | 315 | 836 | Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000300 | 0.999007 | 0.000188 | 0.000169 | 0.000163 | 0.000145 |