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CAZyme Information: MGYG000000480_01280

You are here: Home > Sequence: MGYG000000480_01280

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp900546565
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp900546565
CAZyme ID MGYG000000480_01280
CAZy Family GH10
CAZyme Description Anti-sigma-I factor RsgI6
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
475 MGYG000000480_32|CGC1 55579.8 8.2485
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000480 1940095 MAG Fiji Oceania
Gene Location Start: 668;  End: 2095  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000480_01280.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 114 407 1.8e-35 0.8943894389438944

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 9.33e-25 128 406 3 263
Glycosyl hydrolase family 10.
COG3693 XynA 2.95e-18 128 389 69 314
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QMW04636.1 1.64e-105 22 457 9 449
QNL52536.1 5.11e-101 41 446 21 418
QHV94149.1 4.68e-92 41 463 25 443
AEI51978.1 6.05e-92 41 464 25 440
QIP12711.1 2.90e-90 41 449 25 429

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2F8Q_A 3.44e-09 156 379 70 314
Analkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27],2F8Q_B An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27]
2FGL_A 3.46e-09 156 379 71 315
Analkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27],2FGL_B An alkali thermostable F/10 xylanase from alkalophilic Bacillus sp. NG-27 [Bacillus sp. NG-27]
4QCE_A 3.48e-09 156 379 72 316
Crystalstructure of recombinant alkali thermostable GH10 xylanase from Bacillus sp. NG-27 [Bacillus sp. NG-27],4QCE_B Crystal structure of recombinant alkali thermostable GH10 xylanase from Bacillus sp. NG-27 [Bacillus sp. NG-27]
4QCF_A 3.48e-09 156 379 72 316
Crystalstructure of N-terminal mutant (V1A) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27 [Bacillus sp. NG-27]
4QDM_A 3.48e-09 156 379 72 316
Crystalstructure of N-terminal mutant (V1L) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27 [Bacillus sp. NG-27],4QDM_B Crystal structure of N-terminal mutant (V1L) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27 [Bacillus sp. NG-27]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A3DH97 4.40e-17 55 455 388 748
Anti-sigma-I factor RsgI6 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsgI6 PE=1 SV=1
P23556 9.93e-11 119 407 48 341
Endo-1,4-beta-xylanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=xynA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000890 0.992643 0.005789 0.000234 0.000216 0.000208

TMHMM  Annotations      download full data without filtering help

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