Species | Phascolarctobacterium_A sp900770955 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_C; Negativicutes; Acidaminococcales; Acidaminococcaceae; Phascolarctobacterium_A; Phascolarctobacterium_A sp900770955 | |||||||||||
CAZyme ID | MGYG000000486_01437 | |||||||||||
CAZy Family | GT83 | |||||||||||
CAZyme Description | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase | |||||||||||
CAZyme Property |
|
|||||||||||
Genome Property |
|
|||||||||||
Gene Location | Start: 20513; End: 22102 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT83 | 3 | 509 | 9.4e-113 | 0.9722222222222222 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG1807 | ArnT | 5.04e-54 | 20 | 327 | 24 | 333 | 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. |
PRK13279 | arnT | 1.90e-33 | 31 | 354 | 33 | 356 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase. |
pfam13231 | PMT_2 | 5.85e-22 | 59 | 217 | 1 | 157 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
pfam02366 | PMT | 3.30e-13 | 31 | 225 | 32 | 240 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QTV78033.1 | 0.0 | 1 | 529 | 1 | 529 |
AEQ23377.1 | 4.56e-134 | 1 | 512 | 1 | 525 |
ADB46704.1 | 6.75e-131 | 1 | 524 | 1 | 542 |
AJQ28749.1 | 1.53e-118 | 2 | 505 | 14 | 526 |
AVO74995.1 | 1.36e-115 | 8 | 523 | 30 | 505 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5EZM_A | 5.24e-37 | 6 | 327 | 33 | 361 | CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A4SQX1 | 1.81e-31 | 31 | 328 | 30 | 328 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=arnT PE=3 SV=1 |
A0KGY4 | 6.08e-31 | 31 | 328 | 30 | 328 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=arnT PE=3 SV=1 |
A8GDR9 | 1.97e-28 | 6 | 336 | 8 | 337 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Serratia proteamaculans (strain 568) OX=399741 GN=arnT PE=3 SV=1 |
B4TBG8 | 6.20e-28 | 4 | 354 | 6 | 352 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Salmonella heidelberg (strain SL476) OX=454169 GN=arnT PE=3 SV=1 |
A1JPM4 | 1.58e-27 | 7 | 338 | 12 | 339 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=arnT PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.992625 | 0.007217 | 0.000131 | 0.000012 | 0.000011 | 0.000031 |
start | end |
---|---|
5 | 27 |
80 | 102 |
109 | 126 |
130 | 149 |
156 | 170 |
174 | 191 |
203 | 225 |
252 | 271 |
292 | 314 |
339 | 361 |
368 | 390 |
395 | 417 |
Copyright 2022 © YIN LAB, UNL. All rights reserved. Designed by Jinfang Zheng and Boyang Hu. Maintained by Yanbin Yin.