dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000000504_00819

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Basic Information help

Species

CAG-312 sp000438015

Lineage

Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp000438015

CAZyme ID

MGYG000000504_00819

CAZy Family

GH109

CAZyme Description

scyllo-inositol 2-dehydrogenase (NAD(+))

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
442	MGYG000000504_6\|CGC1	49332.77	8.082

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000504	2519783	MAG	Fiji	Oceania

Gene Location

Start: 33893; End: 35221 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000000504_00819.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH109	35	208	3.4e-17	0.39598997493734334

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG0673	MviM	1.29e-32	36	404	3	337	Predicted dehydrogenase [General function prediction only].
pfam01408	GFO_IDH_MocA	1.02e-12	37	176	1	116	Oxidoreductase family, NAD-binding Rossmann fold. This family of enzymes utilize NADP or NAD. This family is called the GFO/IDH/MOCA family in swiss-prot.
TIGR04380	myo_inos_iolG	2.38e-12	36	203	1	145	inositol 2-dehydrogenase. All members of the seed alignment for this model are known or predicted inositol 2-dehydrogenase sequences co-clustered with other enzymes for catabolism of myo-inositol or closely related compounds. Inositol 2-dehydrogenase catalyzes the first step in inositol catabolism. Members of this family may vary somewhat in their ranges of acceptable substrates and some may act on analogs to myo-inositol rather than myo-inositol per se. [Energy metabolism, Sugars]
PRK11579	PRK11579	1.35e-06	35	202	3	144	putative oxidoreductase; Provisional
COG4091	COG4091	5.88e-05	37	174	18	153	Predicted homoserine dehydrogenase, contains C-terminal SAF domain [Amino acid transport and metabolism].

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AQT66975.1	1.28e-104	5	442	12	425
AWI08226.1	1.53e-95	1	442	1	430
QDU82142.1	4.10e-95	6	441	8	431
AGA27011.1	1.17e-94	6	442	9	429
QHT70106.1	7.51e-94	1	442	10	445

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3MZ0_A	8.92e-07	37	267	3	188	Crystalstructure of apo myo-inositol dehydrogenase from Bacillus subtilis [Bacillus subtilis]
3NT2_A	1.19e-06	37	267	3	188	Crystalstructure of myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor [Bacillus subtilis],3NT2_B Crystal structure of myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor [Bacillus subtilis],3NT4_A Crystal structure of myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor NADH and inositol [Bacillus subtilis],3NT4_B Crystal structure of myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor NADH and inositol [Bacillus subtilis],3NT5_A Crystal structure of myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor and product inosose [Bacillus subtilis],3NT5_B Crystal structure of myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor and product inosose [Bacillus subtilis]
3E82_A	5.21e-06	119	321	67	267	Crystalstructure of a putative oxidoreductase from Klebsiella pneumoniae [Micrococcus luteus NCTC 2665],3E82_B Crystal structure of a putative oxidoreductase from Klebsiella pneumoniae [Micrococcus luteus NCTC 2665],3E82_D Crystal structure of a putative oxidoreductase from Klebsiella pneumoniae [Micrococcus luteus NCTC 2665],3E82_E Crystal structure of a putative oxidoreductase from Klebsiella pneumoniae [Micrococcus luteus NCTC 2665]
6NOR_A	6.87e-06	112	337	77	277	Crystalstructure of GenD2 from gentamicin A biosynthesis in complex with NAD [Micromonospora echinospora],6NOR_B Crystal structure of GenD2 from gentamicin A biosynthesis in complex with NAD [Micromonospora echinospora],6NOR_C Crystal structure of GenD2 from gentamicin A biosynthesis in complex with NAD [Micromonospora echinospora],6NOR_D Crystal structure of GenD2 from gentamicin A biosynthesis in complex with NAD [Micromonospora echinospora],6NOR_E Crystal structure of GenD2 from gentamicin A biosynthesis in complex with NAD [Micromonospora echinospora],6NOR_F Crystal structure of GenD2 from gentamicin A biosynthesis in complex with NAD [Micromonospora echinospora]
4L8V_A	8.50e-06	115	267	62	188	CrystalStructure of A12K/D35S mutant myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor NADP [Bacillus subtilis subsp. subtilis str. 168],4L8V_B Crystal Structure of A12K/D35S mutant myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor NADP [Bacillus subtilis subsp. subtilis str. 168],4L8V_C Crystal Structure of A12K/D35S mutant myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor NADP [Bacillus subtilis subsp. subtilis str. 168],4L8V_D Crystal Structure of A12K/D35S mutant myo-inositol dehydrogenase from Bacillus subtilis with bound cofactor NADP [Bacillus subtilis subsp. subtilis str. 168]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A8H2K3	7.96e-12	4	208	3	209	Glycosyl hydrolase family 109 protein OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) OX=398579 GN=Spea_1465 PE=3 SV=1
A6WQ58	5.90e-11	1	230	1	228	Glycosyl hydrolase family 109 protein OS=Shewanella baltica (strain OS185) OX=402882 GN=Shew185_2813 PE=3 SV=1
A3D6B7	7.84e-11	1	230	1	228	Glycosyl hydrolase family 109 protein OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) OX=325240 GN=Sbal_2793 PE=3 SV=1
A9KUT1	1.84e-10	1	230	1	228	Glycosyl hydrolase family 109 protein OS=Shewanella baltica (strain OS195) OX=399599 GN=Sbal195_2933 PE=3 SV=1
Q8ECL7	7.61e-10	1	230	1	228	Alpha-N-acetylgalactosaminidase OS=Shewanella oneidensis (strain MR-1) OX=211586 GN=nagA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as TAT

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000000	0.000000	0.000000	0.999972	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000000504_00819.