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CAZyme Information: MGYG000000504_00894

You are here: Home > Sequence: MGYG000000504_00894

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-312 sp000438015
Lineage Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp000438015
CAZyme ID MGYG000000504_00894
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
645 MGYG000000504_6|CGC3 72982.82 8.312
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000504 2519783 MAG Fiji Oceania
Gene Location Start: 127424;  End: 129361  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000504_00894.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 419 596 2e-52 0.9720670391061452

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07940 Hepar_II_III 7.52e-08 424 602 29 200
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.
pfam16332 DUF4962 2.88e-04 50 189 135 290
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AYB29714.1 5.90e-186 44 643 21 600
QGT72630.1 1.67e-172 44 645 23 604
QUT49750.1 3.94e-172 44 644 25 607
QNL40059.1 1.34e-171 44 645 23 604
QHT65845.1 1.66e-171 46 643 31 609

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 3.60e-06 50 564 137 657
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000222 0.999181 0.000181 0.000142 0.000132 0.000125

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000504_00894.