CAZyme Information: MGYG000000504_01576

Basic Information

• Species: CAG-312 sp000438015
• Lineage: Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp000438015
• CAZyme ID: MGYG000000504_01576
• CAZy Family: GH39
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
651		73244.97	6.9996

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000504	2519783	MAG	Fiji	Oceania

• Gene Location: Start: 33272; End: 35227 Strand: +

Full Sequence      

MKKNIFASLLCCILAMFAKAETPTSPTVNTPKFYMGVCTHFAQYKGDLKLNLKMIKDAGF
NSIRDDIYWSQVEREKGKYDYPKMFLEAPSEAQKAGLVQLSVLAYGNPLYDGGAYPQTNA
SAEAYSNFAADVAKKLKGKNAFYQVWNEWDGGCGMPKFRGTSTPKGYAELLKKSYEKIKA
ADADATVVLNSICKGDKEFEELLKNGVIQNCDVLSLHTYNHSESQFNRTPEAWYKRMLGV
GEIVKKYNSGKTKDLFITEMGFNNRTGRNGYTYAQSADYAARLYLLARTIPWIKGIWWYD
FQDDGIDESELEDNFGLVKYDLTPKPAYYALQSISHIIKNGEFAGKFSSKNKNLYVLRFK
VDENDVLAIWNSDPKNHAKITIKNKSPNRSNFTLYHAGSSPLKSGWGMIDKLSHGNFIPD
SISFSATERPLILEGDFSNIEISEAEIISFDETKRPDETNLFLPEKVLIVKNPNTPPETV
KIDETRDGPLPQESDLSASAQFSYTRDILKVKVFVKDNGFDFTNDIKKYRNFDHLELSFK
VDDKNAPGECTTFAVAAHQSQGLKSIPVKTQFGQSAADIEGKFEISTGGYTYDIDIPAAA
LGLVAFEKNLSIGASITVEDFDDLKKTHTLRWGKGNTFPVEMRNFKMLYFN

Enzyme Prediction     

No EC number prediction in MGYG000000504_01576.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH39	120	377	3.9e-30	0.6194895591647331

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd00241	DOMON_like	5.51e-06	487	632	9	158	Domon-like ligand-binding domains. DOMON-like domains can be found in all three kindgoms of life and are a diverse group of ligand binding domains that have been shown to interact with sugars and hemes. DOMON domains were initially thought to confer protein-protein interactions. They were subsequently found as a heme-binding motif in cellobiose dehydrogenase, an extracellular fungal oxidoreductase that degrades both lignin and cellulose, and in ethylbenzene dehydrogenase, an enzyme that aids in the anaerobic degradation of hydrocarbons. The domain interacts with sugars in the type 9 carbohydrate binding modules (CBM9), which are present in a variety of glycosyl hydrolases, and it can also be found at the N-terminus of sensor histidine kinases.
cd09621	CBM9_like_5	1.25e-05	493	635	25	173	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other functional domains such as glycosyl hydrolases. The CBM9 module in these architectures may be involved in binding to carbohydrates.
cd09619	CBM9_like_4	2.59e-04	474	623	14	162	DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other domains.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM46868.1	3.80e-110	1	650	1	640
QCQ20833.1	4.86e-69	33	373	41	379
AEJ04930.1	2.67e-64	14	389	19	386
AGA87124.1	2.11e-62	14	372	19	369
QFU12028.1	2.27e-62	24	372	24	369

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5JVK_A	4.35e-31	35	343	106	420	Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000242	0.998955	0.000310	0.000166	0.000155	0.000139

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000504_01576.