dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000000504_01697

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Basic Information help

Species

CAG-312 sp000438015

Lineage

Bacteria; Verrucomicrobiota; Verrucomicrobiae; Opitutales; CAG-312; CAG-312; CAG-312 sp000438015

CAZyme ID

MGYG000000504_01697

CAZy Family

GH142

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
573		65744.59	8.3943

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000504	2519783	MAG	Fiji	Oceania

Gene Location

Start: 2483; End: 4204 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000000504_01697.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH142	64	566	6.4e-164	0.9916492693110647

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK10137	PRK10137	2.10e-08	264	316	578	630	alpha-glucosidase; Provisional
pfam17389	Bac_rhamnosid6H	5.11e-04	267	320	172	225	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
PRK13270	treF	0.002	238	317	319	402	alpha,alpha-trehalase TreF.
cd01105	HTH_GlnR-like	0.005	241	308	2	86	Helix-Turn-Helix DNA binding domain of GlnR-like transcription regulators. Helix-turn-helix (HTH) transcription regulator GlnR and related proteins, N-terminal domain. The GlnR and TnrA (also known as ScgR) proteins have been shown to regulate expression of glutamine synthetase as well as several genes involved in nitrogen metabolism. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CUA19757.1	2.72e-186	59	558	34	516
QUU04108.1	1.10e-185	59	558	34	516
QRP88912.1	1.10e-185	59	558	34	516
QCQ42889.1	1.10e-185	59	558	34	516
AKA52990.1	1.10e-185	59	558	34	516

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5MQS_A	2.48e-103	50	566	619	1098	SialidaseBT_1020 [Bacteroides thetaiotaomicron]
5MQR_A	3.41e-98	50	566	619	1098	SialidaseBT_1020 [Bacteroides thetaiotaomicron]
6M5A_A	7.36e-19	88	566	309	806	Crystalstructure of GH121 beta-L-arabinobiosidase HypBA2 from Bifidobacterium longum [Bifidobacterium longum]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
E8MGH9	5.55e-18	88	566	340	837	Beta-L-arabinobiosidase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=hypBA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.005459	0.993493	0.000349	0.000215	0.000214	0.000246

TMHMM Annotations download full data without filtering help

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