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CAZyme Information: MGYG000000514_01387

You are here: Home > Sequence: MGYG000000514_01387

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-590 sp900769115
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-590; CAG-590 sp900769115
CAZyme ID MGYG000000514_01387
CAZy Family GH53
CAZyme Description HTH-type transcriptional repressor PurR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
620 MGYG000000514_24|CGC1 72435.15 4.787
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000514 3147233 MAG Fiji Oceania
Gene Location Start: 23604;  End: 25466  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000514_01387.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01949 GGDEF 1.06e-45 468 614 2 155
Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.
COG1609 PurR 2.69e-43 66 285 114 330
DNA-binding transcriptional regulator, LacI/PurR family [Transcription].
COG2199 GGDEF 1.93e-41 457 614 11 176
GGDEF domain, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants [Signal transduction mechanisms].
cd06267 PBP1_LacI_sugar_binding-like 2.97e-41 66 278 55 263
ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. Ligand binding domain of the LacI transcriptional regulator family belonging to the type 1 periplasmic-binding fold protein superfamily. In most cases, ligands are monosaccharide including lactose, ribose, fructose, xylose, arabinose, galactose/glucose, and other sugars. The LacI family of proteins consists of transcriptional regulators related to the lac repressor. In this case, the domain sugar binding changes the DNA binding activity of the repressor domain.
smart00267 GGDEF 6.90e-37 468 618 5 162
diguanylate cyclase. Diguanylate cyclase, present in a variety of bacteria.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ACR74768.1 5.50e-146 1 616 1 620
CBK91062.1 2.13e-145 1 616 1 620
CBK94002.1 4.19e-145 1 613 1 615
SQK97389.1 3.15e-11 457 606 254 410
QSI76090.1 8.13e-11 469 614 216 368

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3IGN_A 2.25e-20 461 618 3 168
ChainA, Diguanylate cyclase [Marinobacter nauticus VT8]
4WXO_A 5.84e-19 460 614 41 200
SadC(300-487) from Pseudomonas aeruginosa PAO1 [Pseudomonas aeruginosa PAO1],4WXO_B SadC (300-487) from Pseudomonas aeruginosa PAO1 [Pseudomonas aeruginosa PAO1],4WXO_C SadC (300-487) from Pseudomonas aeruginosa PAO1 [Pseudomonas aeruginosa PAO1]
6ZXB_A 2.00e-18 468 615 133 290
ChainA, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXB_B Chain B, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']
6ZXM_A 2.15e-18 468 615 158 315
ChainA, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXM_B Chain B, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXM_C Chain C, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXM_D Chain D, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXM_E Chain E, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXM_F Chain F, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']
6ZXC_A 2.89e-18 468 615 158 315
ChainA, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXC_B Chain B, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXC_C Chain C, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'],6ZXC_D Chain D, Putative GGDEF/response regulator receiver domain protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)']

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P75908 7.55e-17 468 618 284 442
Probable diguanylate cyclase DgcT OS=Escherichia coli (strain K12) OX=83333 GN=dgcT PE=1 SV=1
Q9HT84 1.50e-16 469 610 514 662
Diguanylate cyclase DgcP OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=dgcP PE=1 SV=1
A0A0H2ZJS2 1.98e-16 469 610 514 662
Diguanylate cyclase DgcP OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=dgcP PE=1 SV=1
Q9HYT3 3.02e-16 458 594 337 472
Uncharacterized signaling protein PA3311 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA3311 PE=3 SV=1
P76245 7.34e-16 457 618 165 334
Diguanylate cyclase DgcP OS=Escherichia coli (strain K12) OX=83333 GN=dgcP PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000083 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000514_01387.