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CAZyme Information: MGYG000000520_00010

You are here: Home > Sequence: MGYG000000520_00010

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Firm-07 sp900548735
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; CAG-272; Firm-07; Firm-07 sp900548735
CAZyme ID MGYG000000520_00010
CAZy Family GH36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
679 75716.72 7.0284
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000520 1867000 MAG Fiji Oceania
Gene Location Start: 10071;  End: 12110  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000520_00010.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam05691 Raffinose_syn 4.28e-64 86 645 80 715
Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C.
PLN02684 PLN02684 8.60e-53 73 542 64 570
Probable galactinol--sucrose galactosyltransferase
PLN02219 PLN02219 3.17e-51 86 622 77 678
probable galactinol--sucrose galactosyltransferase 2
PLN02355 PLN02355 7.96e-49 113 622 120 686
probable galactinol--sucrose galactosyltransferase 1
PLN02711 PLN02711 1.80e-47 111 542 128 599
Probable galactinol--sucrose galactosyltransferase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEE97182.1 1.30e-133 78 647 102 657
ALS27096.1 6.62e-125 59 638 97 681
QHT60825.1 2.12e-124 78 661 117 684
QHW35511.1 5.74e-123 77 661 128 695
QIZ10346.1 5.22e-120 66 636 110 666

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q94A08 6.34e-48 86 622 77 677
Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2
Q8RX87 1.89e-44 73 542 64 568
Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2
Q84VX0 4.86e-44 86 651 77 712
Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1
Q8VWN6 3.90e-43 86 542 119 620
Galactinol--sucrose galactosyltransferase OS=Pisum sativum OX=3888 GN=RFS PE=1 SV=1
Q5VQG4 3.10e-41 73 542 92 605
Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica OX=39947 GN=RFS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999323 0.000700 0.000004 0.000001 0.000001 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000520_00010.