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CAZyme Information: MGYG000000526_01495

You are here: Home > Sequence: MGYG000000526_01495

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900770395
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900770395
CAZyme ID MGYG000000526_01495
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
474 MGYG000000526_7|CGC1 53128.39 6.8378
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000526 3510035 MAG Fiji Oceania
Gene Location Start: 152702;  End: 154126  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000526_01495.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 211 464 3.2e-41 0.7476923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 9.13e-14 222 363 230 366
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03003 PLN03003 3.31e-07 243 395 148 291
Probable polygalacturonase At3g15720
pfam00295 Glyco_hydro_28 3.33e-07 241 395 93 239
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 3.01e-05 193 390 115 305
polygalacturonase
pfam13229 Beta_helix 7.00e-05 235 396 2 143
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QQY39815.1 4.19e-137 4 472 7 451
ABR37851.1 4.19e-137 4 472 7 451
QUT34117.1 3.72e-136 1 472 1 454
QUU00181.1 5.27e-136 1 472 1 454
QUT92200.1 2.71e-135 11 472 12 451

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DBR6 2.80e-09 213 430 231 423
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1
A2QCV8 1.40e-06 243 429 145 309
Probable endopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaB PE=3 SV=1
Q9P4W3 1.40e-06 243 429 145 309
Endopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgaB PE=1 SV=1
O42809 6.08e-06 246 422 171 320
Endopolygalacturonase E OS=Aspergillus niger OX=5061 GN=pgaE PE=1 SV=1
B8MW78 7.51e-06 214 446 254 464
Probable endopolygalacturonase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000945 0.375918 0.622723 0.000144 0.000133 0.000124

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000526_01495.