dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000000537_00613

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Basic Information help

Species

UMGS1826 sp900555435

Lineage

Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UMGS1826; UMGS1826 sp900555435

CAZyme ID

MGYG000000537_00613

CAZy Family

GT8

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
415		47734.24	5.4066

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000537	2340074	MAG	Fiji	Oceania

Gene Location

Start: 12070; End: 13317 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000000537_00613.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT8	149	396	1.1e-46	0.8793774319066148

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd04194	GT8_A4GalT_like	8.14e-68	150	396	1	248	A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.
COG2153	ElaA	1.99e-43	1	147	3	154	Predicted N-acyltransferase, GNAT family [General function prediction only].
COG1442	RfaJ	4.11e-40	149	396	2	246	Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis].
pfam01501	Glyco_transf_8	3.57e-33	151	396	1	250	Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.
PRK10314	PRK10314	2.22e-21	10	146	11	151	GNAT family N-acetyltransferase.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CDX04293.1	2.16e-86	152	411	3	267
ACL19350.1	3.06e-86	152	414	3	270
BAE85862.1	6.81e-86	152	414	17	284
ARC85976.1	4.63e-84	152	415	3	271
AFL99655.1	1.25e-82	152	408	3	264

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3TZT_A	1.16e-53	152	414	8	272	Thestructure of a protein in glycosyl transferase family 8 from Anaerococcus prevotii. [Anaerococcus prevotii DSM 20548],3TZT_B The structure of a protein in glycosyl transferase family 8 from Anaerococcus prevotii. [Anaerococcus prevotii DSM 20548]
1XEB_A	5.56e-24	6	144	8	150	CrystalStructure of an Acyl-CoA N-acyltransferase from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1XEB_B Crystal Structure of an Acyl-CoA N-acyltransferase from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1XEB_C Crystal Structure of an Acyl-CoA N-acyltransferase from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1XEB_D Crystal Structure of an Acyl-CoA N-acyltransferase from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1XEB_E Crystal Structure of an Acyl-CoA N-acyltransferase from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1XEB_F Crystal Structure of an Acyl-CoA N-acyltransferase from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1XEB_G Crystal Structure of an Acyl-CoA N-acyltransferase from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1XEB_H Crystal Structure of an Acyl-CoA N-acyltransferase from Pseudomonas aeruginosa [Pseudomonas aeruginosa]
5Z6N_A	8.52e-19	10	143	11	148	Crystalstructure of Escherichia coli ElaA [Escherichia coli K-12],5Z6N_B Crystal structure of Escherichia coli ElaA [Escherichia coli K-12]
1SS9_A	3.25e-13	159	399	10	257	ChainA, alpha-1,4-galactosyl transferase [Neisseria meningitidis]
1G9R_A	5.87e-13	159	399	10	257	ChainA, GLYCOSYL TRANSFERASE [Neisseria meningitidis],1GA8_A Chain A, GALACTOSYL TRANSFERASE LGTC [Neisseria meningitidis]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q10081	1.67e-25	1	141	4	146	UPF0039 protein C11D3.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC11D3.02c PE=3 SV=1
P27129	1.10e-19	134	394	2	272	Lipopolysaccharide 1,2-glucosyltransferase OS=Escherichia coli (strain K12) OX=83333 GN=rfaJ PE=3 SV=2
P0AEH4	4.66e-18	10	143	11	148	Protein ElaA OS=Shigella flexneri OX=623 GN=elaA PE=3 SV=1
P0AEH3	4.66e-18	10	143	11	148	Protein ElaA OS=Escherichia coli (strain K12) OX=83333 GN=elaA PE=1 SV=1
P19817	1.05e-17	221	409	97	285	Lipopolysaccharide 1,2-glucosyltransferase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rfaJ PE=3 SV=4

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000073	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000000537_00613.