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CAZyme Information: MGYG000000538_02438

You are here: Home > Sequence: MGYG000000538_02438

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp900549045
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp900549045
CAZyme ID MGYG000000538_02438
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
606 MGYG000000538_14|CGC2 69476.67 9.2045
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000538 3384359 MAG Fiji Oceania
Gene Location Start: 65323;  End: 67143  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000538_02438.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 64 211 2.2e-24 0.39211136890951276

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01229 Glyco_hydro_39 1.15e-05 106 177 122 198
Glycosyl hydrolases family 39.
COG3867 GanB 0.002 44 239 69 285
Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 6.17e-146 2 586 5 590
QDU57372.1 5.86e-99 17 602 22 621
AVM44901.1 2.73e-59 6 568 10 588
AHF90941.1 2.79e-48 17 564 226 803
SDS89296.1 6.36e-29 22 242 303 530

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 5.26e-13 26 239 107 343
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000200 0.999130 0.000183 0.000153 0.000143 0.000137

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000538_02438.