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CAZyme Information: MGYG000000543_00750
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Agathobacter sp900552085 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Agathobacter; Agathobacter sp900552085 | |||||||||||
| CAZyme ID | MGYG000000543_00750 | |||||||||||
| CAZy Family | GH53 | |||||||||||
| CAZyme Description | Arabinogalactan endo-beta-1,4-galactanase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 85739; End: 87058 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH53 | 67 | 431 | 3.3e-125 | 0.9970760233918129 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3867 | GanB | 6.53e-140 | 59 | 438 | 32 | 398 | Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]. |
| pfam07745 | Glyco_hydro_53 | 1.11e-127 | 67 | 431 | 1 | 333 | Glycosyl hydrolase family 53. This domain belongs to family 53 of the glycosyl hydrolase classification. These enzymes are enzymes are endo-1,4- beta-galactanases (EC:3.2.1.89). The structure of this domain is known and has a TIM barrel fold. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNM02974.1 | 4.39e-204 | 2 | 438 | 6 | 452 |
| AEN96353.1 | 2.32e-202 | 54 | 438 | 71 | 455 |
| VCV20364.1 | 2.89e-201 | 54 | 438 | 171 | 555 |
| ADL35781.1 | 8.49e-198 | 54 | 437 | 96 | 479 |
| AOZ95704.1 | 3.40e-189 | 62 | 436 | 65 | 439 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1R8L_A | 2.00e-150 | 56 | 438 | 14 | 395 | Thestructure of endo-beta-1,4-galactanase from Bacillus licheniformis [Bacillus licheniformis],1R8L_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis [Bacillus licheniformis],1UR0_A The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR0_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR4_A The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],1UR4_B The structure of endo-beta-1,4-galactanase from Bacillus licheniformis in complex with two oligosaccharide products. [Bacillus licheniformis],2CCR_A Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2CCR_B Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2J74_A Structure of Beta-1,4-Galactanase [Bacillus licheniformis],2J74_B Structure of Beta-1,4-Galactanase [Bacillus licheniformis] |
| 2GFT_A | 1.63e-149 | 56 | 438 | 14 | 395 | ChainA, Glycosyl Hydrolase Family 53 [Bacillus licheniformis],2GFT_B Chain B, Glycosyl Hydrolase Family 53 [Bacillus licheniformis] |
| 7OSK_A | 3.56e-94 | 54 | 437 | 38 | 397 | ChainA, Arabinogalactan endo-1,4-beta-galactosidase [Ignisphaera aggregans DSM 17230],7OSK_B Chain B, Arabinogalactan endo-1,4-beta-galactosidase [Ignisphaera aggregans DSM 17230] |
| 1HJQ_A | 3.33e-48 | 68 | 380 | 5 | 314 | Structureof two fungal beta-1,4-galactanases: searching for the basis for temperature and pH optimum. [Humicola insolens] |
| 4BF7_A | 1.07e-47 | 68 | 382 | 22 | 333 | Emericillanidulans endo-beta-1,4-galactanase [Aspergillus nidulans] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q65CX5 | 2.58e-149 | 56 | 438 | 39 | 420 | Endo-beta-1,4-galactanase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=ganB PE=1 SV=1 |
| O07013 | 1.23e-148 | 56 | 437 | 43 | 423 | Endo-beta-1,4-galactanase OS=Bacillus subtilis (strain 168) OX=224308 GN=ganB PE=1 SV=1 |
| P48843 | 2.97e-59 | 66 | 439 | 6 | 351 | Uncharacterized protein in bgaB 5'region (Fragment) OS=Niallia circulans OX=1397 PE=3 SV=1 |
| P48841 | 3.51e-49 | 66 | 419 | 27 | 351 | Arabinogalactan endo-beta-1,4-galactanase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=ganB PE=1 SV=1 |
| Q0CTQ7 | 5.20e-48 | 68 | 382 | 19 | 332 | Probable arabinogalactan endo-beta-1,4-galactanase A OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=galA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000000 | 0.000002 | 1.000044 | 0.000000 | 0.000000 | 0.000000 |