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CAZyme Information: MGYG000000543_01561

You are here: Home > Sequence: MGYG000000543_01561

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Agathobacter sp900552085
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Agathobacter; Agathobacter sp900552085
CAZyme ID MGYG000000543_01561
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
667 MGYG000000543_13|CGC1 71507.63 7.804
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000543 2969366 MAG Fiji Oceania
Gene Location Start: 65727;  End: 67730  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000543_01561.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 48 292 1.4e-92 0.9802371541501976
CBM65 549 663 3.9e-26 0.9649122807017544
CBM13 363 467 4.1e-17 0.5159574468085106

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00150 Cellulase 2.46e-32 47 291 1 272
Cellulase (glycosyl hydrolase family 5).
pfam18259 CBM65_1 3.48e-25 550 663 1 113
Carbohydrate binding module 65 domain 1. This domain is found in the non-catalytic carbohydrate binding module 65B (CMB65B) present in Eubacterium cellulosolvens. CBMs are present in plant cell wall degrading enzymes and are responsible for targeting, which enhances catalysis. CBM65s display higher affinity for oligosaccharides, such as cellohexaose, and particularly polysaccharides than cellotetraose, which fully occupies the core component of the substrate binding cleft. The concave surface presented by beta-sheet 2 comprises the beta-glucan binding site in CBM65s. C6 of all the backbone glucose moieties makes extensive hydrophobic interactions with the surface tryptophans of CBM65s. Three out of the four surface Trp are highly conserved. The conserved metal ion site typical of CBMs is absent in this CBM65 family.
pfam14200 RicinB_lectin_2 3.43e-23 373 452 12 89
Ricin-type beta-trefoil lectin domain-like.
pfam14200 RicinB_lectin_2 5.48e-16 409 500 1 89
Ricin-type beta-trefoil lectin domain-like.
pfam00652 Ricin_B_lectin 8.77e-10 375 510 2 126
Ricin-type beta-trefoil lectin domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CCO04360.1 9.24e-249 31 665 33 637
ADU21877.1 4.40e-180 9 667 12 485
CBI12654.1 1.47e-133 31 332 186 486
QWX86966.1 1.17e-132 31 332 186 486
QKI00895.1 1.17e-132 31 332 186 486

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1WKY_A 2.78e-125 35 337 6 308
Crystalstructure of alkaline mannanase from Bacillus sp. strain JAMB-602: catalytic domain and its Carbohydrate Binding Module [Bacillus sp. JAMB-602]
3JUG_A 3.38e-122 27 335 13 321
Crystalstructure of endo-beta-1,4-mannanase from the alkaliphilic Bacillus sp. N16-5 [Bacillus sp. N16-5]
2WHJ_A 1.69e-120 38 333 2 297
Understandinghow diverse mannanases recognise heterogeneous substrates [Salipaludibacillus agaradhaerens]
2WHL_A 4.62e-116 38 332 1 293
Understandinghow diverse mannanases recognise heterogeneous substrates [Salipaludibacillus agaradhaerens]
1BQC_A 4.45e-79 36 332 1 301
Beta-MannanaseFrom Thermomonospora Fusca [Thermobifida fusca],2MAN_A Mannotriose Complex Of Thermomonospora Fusca Beta-Mannanase [Thermobifida fusca],3MAN_A Mannohexaose Complex Of Thermomonospora Fusca Beta-mannanase [Thermobifida fusca]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G1K3N4 9.25e-120 38 333 2 297
Mannan endo-1,4-beta-mannosidase OS=Salipaludibacillus agaradhaerens OX=76935 PE=1 SV=1
P51529 9.24e-85 33 339 34 342
Mannan endo-1,4-beta-mannosidase OS=Streptomyces lividans OX=1916 GN=manA PE=1 SV=2
B3PF24 1.88e-72 17 339 28 352
Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=man5A PE=1 SV=1
P22533 2.91e-58 1 312 1 313
Beta-mannanase/endoglucanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=manA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000222 0.999103 0.000186 0.000169 0.000156 0.000137

TMHMM  Annotations      download full data without filtering help

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