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CAZyme Information: MGYG000000550_00655

You are here: Home > Sequence: MGYG000000550_00655

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lawsonibacter sp900545895
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Oscillospiraceae; Lawsonibacter; Lawsonibacter sp900545895
CAZyme ID MGYG000000550_00655
CAZy Family SLH
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
630 MGYG000000550_12|CGC1 66500.98 3.9447
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000550 2679456 MAG China Asia
Gene Location Start: 16882;  End: 18774  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4

CAZyme Signature Domains help

Family Start End Evalue family coverage
SLH 82 123 3.1e-16 0.9761904761904762

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00395 SLH 1.41e-11 82 123 1 42
S-layer homology domain.
NF033190 inl_like_NEAT_1 2.59e-07 29 122 653 743
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
pfam00395 SLH 0.006 30 59 13 42
S-layer homology domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKS47384.1 1.12e-11 28 140 1552 1659
AIQ45999.1 2.40e-11 30 179 1174 1337
QRG70577.1 3.30e-11 31 180 58 216
AWP25495.1 8.93e-11 38 154 62 173
AVV56260.1 2.04e-10 38 154 62 173

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P06546 4.10e-17 31 201 43 211
Middle cell wall protein OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=BBR47_54160 PE=4 SV=4
P38538 3.19e-14 31 160 71 199
Surface layer protein OS=Brevibacillus choshinensis OX=54911 PE=1 SV=1
P22258 4.14e-10 28 175 41 185
Cell surface protein OS=Thermoanaerobacter kivui OX=2325 PE=1 SV=1
Q06848 1.66e-07 54 131 257 334
Cellulosome-anchoring protein OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ancA PE=1 SV=1
Q06852 6.75e-07 54 131 2118 2194
Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000265 0.999071 0.000169 0.000183 0.000163 0.000154

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000550_00655.