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CAZyme Information: MGYG000000553_00067

You are here: Home > Sequence: MGYG000000553_00067

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900548535
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900548535
CAZyme ID MGYG000000553_00067
CAZy Family CBM50
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
463 MGYG000000553_1|CGC2 52815.02 9.7106
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000553 2921999 MAG China Asia
Gene Location Start: 91479;  End: 92870  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000553_00067.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00118 LysM 6.74e-09 30 75 2 45
Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257 LysM 6.83e-08 30 75 1 44
Lysin motif.
pfam01476 LysM 2.42e-07 31 76 1 43
LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
COG1388 LysM 0.001 30 88 68 122
LysM repeat [Cell wall/membrane/envelope biogenesis].
cd14528 PFA-DSP_Siw14 0.010 197 272 50 115
atypical dual specificity phosphatases similar to yeast Siw14. This subfamily contains Saccharomyces Siw14 and a novel phosphatase from the Arabidopsis thaliana gene locus At1g05000. Siw14, also known as Oca3, plays a role in actin filament organization and endocytosis. Siw14 has been shown to be an inositol pyrophosphate phosphatase, hydrolyzing the beta-phosphate from 5-diphosphoinositol pentakisphosphate (5PP-IP5or IP7). The At1g05000 protein, also called AtPFA-DSP1, has been shown to have highest activity toward olyphosphate (poly-P(12-13)) and deoxyribo- and ribonucleoside triphosphates, and less activity toward phosphoenolpyruvate, phosphotyrosine, phosphotyrosine-containing peptides, and phosphatidylinositols. This subfamily belongs to a group of atypical DSPs present in plants, fungi, kinetoplastids, and slime molds called plant and fungi atypical dual-specificity phosphatases (PFA-DSPs).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUB46898.1 1.20e-186 6 463 7 451
ALO48876.1 1.73e-168 1 463 1 448
QUB62527.1 5.84e-163 1 463 1 463
QUB56650.1 8.28e-163 1 463 1 463
QUB57976.1 8.28e-163 1 463 1 463

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.021903 0.546119 0.431024 0.000319 0.000286 0.000335

TMHMM  Annotations      download full data without filtering help

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