logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000553_00449

You are here: Home > Sequence: MGYG000000553_00449

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900548535
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900548535
CAZyme ID MGYG000000553_00449
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
675 MGYG000000553_2|CGC5 72413.06 7.9515
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000553 2921999 MAG China Asia
Gene Location Start: 184310;  End: 186337  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000553_00449.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 116 446 1.8e-47 0.8892307692307693

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02218 PLN02218 1.11e-21 53 465 62 431
polygalacturonase ADPG
pfam00295 Glyco_hydro_28 4.80e-21 142 422 33 303
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 3.57e-20 44 353 71 403
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02793 PLN02793 5.26e-17 47 427 34 399
Probable polygalacturonase
PLN03003 PLN03003 1.37e-15 54 373 19 315
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT65232.1 7.78e-313 1 675 1 668
QEC72689.1 4.57e-61 49 474 51 449
BAV07348.1 7.06e-56 43 469 39 440
AYD47266.1 4.03e-43 42 440 25 409
QEC57624.1 8.92e-43 47 440 32 411

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1BHE_A 1.22e-16 69 417 21 374
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
7E56_A 2.29e-11 102 350 8 256
ChainA, Endo-polygalacturonase [Evansstolkia leycettana]
6KVE_A 2.43e-11 102 350 16 264
ChainA, Endo-polygalacturonase [Evansstolkia leycettana]
6KVH_A 2.43e-11 102 350 16 264
ChainA, endo-polygalacturonase [Evansstolkia leycettana]
1IA5_A 1.76e-09 153 348 72 259
PolygalacturonaseFrom Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P18192 8.34e-16 69 417 47 400
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
P26509 8.34e-16 69 417 47 400
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1
Q9SFB7 1.70e-11 22 451 42 428
Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2
Q40312 2.67e-10 87 423 54 367
Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1
O74213 1.17e-08 153 348 111 298
Endopolygalacturonase I OS=Aspergillus aculeatus OX=5053 GN=pgaI PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000268 0.999016 0.000227 0.000171 0.000163 0.000148

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000553_00449.