CAZyme Information: MGYG000000556_00904

Basic Information

• Species: Collinsella sp003469205
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp003469205
• CAZyme ID: MGYG000000556_00904
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
862	MGYG000000556_65|CGC1	93631.04	4.9282

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000556	1959616	MAG	China	Asia

• Gene Location: Start: 5795; End: 8383 Strand: +

Full Sequence      

MTAYYQQVLNGAYDNHVLPFLWMKGESHKTIAEYLEKIAGADIHEVCLESRPHPDFCGEG
WWRDLRFAIDICKQLGLKIWILDDAHFPTGYANGAVKEAAPELRKIVLTHRTLDIVGPTP
QANIVLTNLFDKTERFYGVTFMQEGHAVEVEHRVIEDEHGIPYRLVFDAPAGITQACVMF
TSGKTSYNEDYINMVDRASVAQLIDAVYEPHFTHLGDEFGKTILGFFSDEPGFANEKGVT
GADGISDTLIGKATAPLPWSAELKRRLRAALGERYLDELPHLWDREPAGAHVRHVYMDIA
STLYKECFCDQLGGWCRAHGVQYIGHVIEDKDCHARLGVGAGHYFRAVGGQDMAGVDIVI
NQLVPGMDQGFHSYGRGVWDLEFYNYVLPKLGSSAAHLDPKKQGRCMAEVFGAFGWHEGL
REMKWIADHFMVRGVNWFVPHAFSMAAFPDWDCPPHFYAHGQNPQFAHFGKLMSYMNRTA
SLLSGGRAATPVALLYHADAEWAGEASFMQHAAAELMRAQIDFDIVPAEAFEDAERYTVA
FTADGGFTVNGQAYRCLVMPGAEFVGGAVLDFAARAAAAGAAVYALDKLPSKRYDGDIAG
REGFASVDASELAGVCVVATSKLASVLAAAGMQTVACAEPQPWLRALRYDRAGESYLMLV
NEHPKQGISTQIAFADGTPVAGARLDLLNGREPVAFEGTLELAPYESCIVVLGAAGSARA
ATAGTEAACIDGPWTVAFSAPGTDAFDESIELAGLHDLSFAEFPGKAGTFRHQASLSVDK
GLTSAALDLGEVFETATVTLDGTLLGTRICPPYRFELGTLAAGEHGLTIDVINTLDHAIP
DMFGMTEPSEPSGLLGPVRVLG

Enzyme Prediction     

No EC number prediction in MGYG000000556_00904.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	28	860	7.6e-67	0.9635922330097088

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	1.26e-05	393	562	566	732	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZH68834.1	0.0	1	862	1	863
ATP54541.1	0.0	12	862	3	850
QNM10672.1	8.42e-312	1	860	1	832
AGF57028.1	1.84e-254	8	861	7	846
AIQ48514.1	2.62e-202	7	860	6	865

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	3.39e-08	648	861	897	1139	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000061	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000556_00904.