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CAZyme Information: MGYG000000559_02449

You are here: Home > Sequence: MGYG000000559_02449

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Paraprevotella sp900546665
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella; Paraprevotella sp900546665
CAZyme ID MGYG000000559_02449
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
483 MGYG000000559_39|CGC1 55364.26 5.9951
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000559 3371833 MAG China Asia
Gene Location Start: 22097;  End: 23548  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000559_02449.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 221 467 1.8e-38 0.6953846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.49e-13 228 483 237 449
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 3.00e-05 237 429 200 379
polygalacturonase ADPG
pfam13229 Beta_helix 0.002 231 335 2 120
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
pfam00295 Glyco_hydro_28 0.004 209 482 88 321
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJR73778.1 1.21e-152 19 483 21 459
QJR69445.1 1.21e-152 19 483 21 459
QJR77942.1 1.21e-152 19 480 21 461
QJR65182.1 1.21e-152 19 483 21 459
QUT85436.1 1.55e-152 19 480 18 458

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000551 0.998760 0.000179 0.000161 0.000151 0.000156

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000559_02449.