logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000562_00361

You are here: Home > Sequence: MGYG000000562_00361

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lachnospira sp000437735
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnospira; Lachnospira sp000437735
CAZyme ID MGYG000000562_00361
CAZy Family PL9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
604 MGYG000000562_2|CGC1 63384.53 9.0035
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000562 2986625 MAG China Asia
Gene Location Start: 11481;  End: 13295  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000562_00361.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL9 193 562 2.2e-58 0.832

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13229 Beta_helix 2.79e-05 280 413 2 119
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
CBZ48778.1 1.81e-211 5 603 2 606
BAK28435.1 1.81e-211 5 603 2 606
QKI00169.1 1.81e-211 5 603 2 606
QWX86240.1 1.81e-211 5 603 2 606
CBI14069.1 1.46e-210 5 603 2 606

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1RU4_A 1.63e-12 250 533 104 296
ChainA, Pectate lyase [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P0C1A6 2.43e-12 250 533 129 321
Pectate lyase L OS=Dickeya chrysanthemi OX=556 GN=pelL PE=3 SV=1
P0C1A7 1.00e-11 250 533 129 321
Pectate lyase L OS=Dickeya dadantii (strain 3937) OX=198628 GN=pelL PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000312 0.998983 0.000198 0.000174 0.000151 0.000149

TMHMM  Annotations      download full data without filtering help

start end
13 32