CAZyme Information: MGYG000000565_01077

Basic Information

• Species: Collinsella sp900545555
• Lineage: Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; Collinsella sp900545555
• CAZyme ID: MGYG000000565_01077
• CAZy Family: GH106
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
863	MGYG000000565_38|CGC1	93646.8	4.6743

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000565	2194949	MAG	China	Asia

• Gene Location: Start: 8285; End: 10876 Strand: -

Full Sequence      

MTAYYQQVLNGAYDNHVLPFLWMKGESHKTIAEYLEKIAGADIHEVCLESRPHPDFCGEG
WWRDLRFVVDTCKQLGLKIWILDDAHFPTGYANGAVKEAAPELRKIVLTHRTIDVVGPTP
QASIVLTNLFDKTERFYGVTFMQEGHAVEVEHSVIEDEHGIPCRLVFDAPAGITQACVMF
TSGKTSYNEGYINMVDRASVAQLIDAVYEPHFTHLGDEFGKTILGFFSDEPGFANEKGTT
GPDGISDTLIGKATAPLPWSAELERRLRAALGERYLAELPHLWDREPAGAHVRHVYMDIA
STLYKECFCDQLGDWCREHGVQYIGHVIEDKDCHARLGVGAGHYFRAVGGQDMAGVDIVI
NQLVPGMDQGFHSYGRGVWDLEFYNYVLPKLGSSAAHLDPKKQGRCMAEVFGAFGWHEGL
REMKWIADHFMVRGVNWFVPHAFSMAAFPDFDCPPHFYAHGQNPQFAHFGKLMSYMNRTS
SLLSGGRVATPVALLYHADAEWAGEASFMQHAAAELVRAQIDFDIVPAEAFEDAERYTVG
VAADGSSFSVNGQAYRCLVMPGAEYVGGAVLDFATRAAAAGVGVYALDRMPSKRYDGEAA
SRAGFAPVEANELAGVCVVATSELASVLGAAGMQTVVCTEPQPWLRALRYDRAGESYLML
VNEHPKQGISTQIAFADSTPVAGARLDLLNDREPVAFEGTLELAPYESCIVVLGAAGSAG
AAAAGDEAACIEGPWTVAFSAPGADAFDEPVELADLHDLSFAEFPGKAGTFRYQASFSVD
KGLTSAALDLGEVFETATVTLDGTLLGTRICPPCRFELGTLAAGEHGLTIDVINTLDHAI
PDMFGMTEPSEPSGLLGPVRVLG

Enzyme Prediction     

No EC number prediction in MGYG000000565_01077.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH106	28	861	4.3e-66	0.9635922330097088

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17132	Glyco_hydro_106	6.18e-05	393	567	566	756	alpha-L-rhamnosidase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AZH68834.1	0.0	1	863	1	863
ATP54541.1	0.0	12	863	3	850
QNM10672.1	4.67e-314	1	861	1	832
AGF57028.1	1.08e-253	8	862	7	846
AIQ48514.1	3.84e-205	7	861	6	865

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6Q2F_A	3.00e-07	729	862	986	1139	Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000106	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000565_01077.