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CAZyme Information: MGYG000000573_00191

You are here: Home > Sequence: MGYG000000573_00191

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gemmiger variabilis_A
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger variabilis_A
CAZyme ID MGYG000000573_00191
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
382 MGYG000000573_3|CGC1 43465.43 4.8607
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000573 2095140 MAG Madagascar Africa
Gene Location Start: 7810;  End: 8958  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000573_00191.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 36 378 9.2e-112 0.9728915662650602

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4225 YesR 3.48e-100 32 376 24 352
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
pfam07470 Glyco_hydro_88 1.18e-77 39 378 25 340
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
pfam03663 Glyco_hydro_76 0.001 38 105 214 287
Glycosyl hydrolase family 76. Family of alpha-1,6-mannanases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXB29657.1 5.14e-237 1 381 1 381
CBL00657.1 2.09e-236 1 381 1 381
ATP00557.1 2.97e-236 1 381 1 381
QIA43718.1 2.97e-236 1 381 1 381
AXA82451.1 2.97e-236 1 381 1 381

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4WU0_A 3.22e-99 41 376 23 357
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]
1NC5_A 2.35e-69 39 377 37 364
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 9.87e-69 39 377 27 354
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
3QWT_A 6.93e-15 41 322 65 332
ChainA, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_B Chain B, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_C Chain C, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A],3QWT_D Chain D, Putative GH105 family protein [Salmonella enterica subsp. enterica serovar Paratyphi A]
3PMM_A 1.32e-13 41 316 66 328
ChainA, Putative cytoplasmic protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 1.29e-68 39 377 37 364
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 1.80e-43 152 378 1 229
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 1.80e-43 152 378 1 229
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1
O31521 4.49e-20 41 319 29 288
Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000057 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000573_00191.