logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000575_01432

You are here: Home > Sequence: MGYG000000575_01432

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11452 sp003526375
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA11452; UBA11452 sp003526375
CAZyme ID MGYG000000575_01432
CAZy Family PL35
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
584 MGYG000000575_44|CGC1 65678.08 9.1433
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000575 4988607 MAG Madagascar Africa
Gene Location Start: 24815;  End: 26569  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000575_01432.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL35 362 530 2.8e-51 0.9608938547486033

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 2.11e-07 1 146 129 290
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 2.60e-07 367 540 29 202
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM46452.1 2.56e-228 2 578 118 695
AVM45628.1 4.01e-183 9 583 106 683
QDV84175.1 2.15e-166 2 578 35 623
QDU87048.1 1.47e-165 9 578 51 630
QDV64416.1 2.91e-153 1 578 70 657

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 3.81e-08 8 271 138 416
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 3.81e-08 8 271 138 416
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000058 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000575_01432.