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CAZyme Information: MGYG000000575_01815

You are here: Home > Sequence: MGYG000000575_01815

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11452 sp003526375
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA11452; UBA11452 sp003526375
CAZyme ID MGYG000000575_01815
CAZy Family CBM67
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1100 122798.57 8.6696
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000575 4988607 MAG Madagascar Africa
Gene Location Start: 6846;  End: 10148  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000575_01815.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM67 942 1055 1.2e-17 0.6988636363636364

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02018 CBM_4_9 4.39e-07 167 291 2 128
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.
pfam08531 Bac_rhamnosid_N 7.40e-07 970 1060 3 114
Alpha-L-rhamnosidase N-terminal domain. This family consists of bacterial rhamnosidase A and B enzymes. This domain is probably involved in substrate recognition.
pfam02018 CBM_4_9 1.05e-04 20 127 2 112
Carbohydrate binding domain. This family includes diverse carbohydrate binding domains.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM43634.1 1.14e-118 82 1079 74 1067
QNK57364.1 4.92e-20 414 808 166 541
QZT35774.1 1.41e-12 540 967 97 521
CCW35746.1 9.71e-09 943 1079 24 168
QFZ72212.1 2.81e-08 941 1093 171 338

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6T0Q_A 7.44e-06 942 1079 198 344
PleurotusOstreatus Lectin (POL), apo form [Pleurotus ostreatus]
6T1D_A 7.52e-06 942 1079 201 347
PleurotusOstreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_B Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_C Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_D Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_E Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus],6T1D_F Pleurotus Ostreatus Lectin (POL), compelx with melibiose [Pleurotus ostreatus]
6KBJ_A 7.94e-06 942 1079 218 364
Structureof Lectin from Pleurotus ostreatus in complex with malonate [Pleurotus ostreatus],6KBQ_A Crystal Structure of Lectin from Pleurotus ostreatus in complex with Glycerol [Pleurotus ostreatus],6KC2_A Crystal Structure of Lectin from Pleurotus ostreatus in complex with Rhamnose [Pleurotus ostreatus],6LI7_A Crystal Structure of Lectin from Pleurotus ostreatus in complex with GalNAc [Pleurotus ostreatus],6LIK_A Crystal Structure of Lectin from Pleurotus ostreatus in complex with Galactose [Pleurotus ostreatus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000200 0.999182 0.000158 0.000144 0.000127 0.000129

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000575_01815.