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CAZyme Information: MGYG000000575_02994

You are here: Home > Sequence: MGYG000000575_02994

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA11452 sp003526375
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA11452; UBA11452 sp003526375
CAZyme ID MGYG000000575_02994
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
622 MGYG000000575_154|CGC1 70060.14 9.2765
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000575 4988607 MAG Madagascar Africa
Gene Location Start: 5325;  End: 7193  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000575_02994.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 67 241 2.4e-24 0.494199535962877

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 1.12e-07 64 169 3 123
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 6.12e-07 64 169 46 163
Glycosyl hydrolase family 10.
COG3693 XynA 1.16e-06 60 170 65 188
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam01229 Glyco_hydro_39 3.13e-04 74 243 74 278
Glycosyl hydrolases family 39.
COG1874 GanA 0.004 29 134 18 121
Beta-galactosidase GanA [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM44885.1 1.49e-126 2 617 4 610
QDU57372.1 2.06e-77 27 620 28 627
AVM44901.1 2.85e-62 26 573 24 590
ACZ43011.1 1.30e-25 27 244 302 534
AVM44950.1 2.00e-24 16 240 300 535

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5JVK_A 1.09e-10 30 379 107 472
Structuralinsights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_B Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus],5JVK_C Structural insights into a family 39 glycoside hydrolase from the gut symbiont Bacteroides cellulosilyticus WH2. [Bacteroides cellulosilyticus]
4XUY_A 6.94e-07 52 169 40 168
Crystalstructure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88],4XUY_B Crystal structure of an endo-beta-1,4-xylanase (glycoside hydrolase family 10/GH10) enzyme from Aspergillus niger [Aspergillus niger CBS 513.88]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A2QFV7 4.32e-06 52 169 65 193
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=xlnC PE=1 SV=1
C5J411 4.32e-06 52 169 65 193
Probable endo-1,4-beta-xylanase C OS=Aspergillus niger OX=5061 GN=xlnC PE=2 SV=2
P33559 4.32e-06 52 187 65 211
Endo-1,4-beta-xylanase A OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=xynA PE=1 SV=2
Q96VB6 5.64e-06 52 169 61 189
Endo-1,4-beta-xylanase F3 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF3 PE=1 SV=1
B4XVN1 8.32e-06 3 167 16 200
Endo-1,4-beta-xylanase A OS=Streptomyces sp. OX=1931 GN=xynAS9 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000974 0.996383 0.001852 0.000257 0.000249 0.000250

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000575_02994.