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CAZyme Information: MGYG000000582_00429

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lactococcus garvieae
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus garvieae
CAZyme ID MGYG000000582_00429
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
291 MGYG000000582_3|CGC1 33763.59 5.2892
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000582 2064828 MAG Madagascar Africa
Gene Location Start: 92508;  End: 93383  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000582_00429.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1216 GT2 8.26e-12 2 188 1 195
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism].
cd02526 GT2_RfbF_like 1.49e-11 39 214 27 206
RfbF is a putative dTDP-rhamnosyl transferase. Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.
pfam00535 Glycos_transf_2 3.93e-07 21 171 15 164
Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.
cd00761 Glyco_tranf_GTA_type 8.09e-06 21 202 14 154
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.
pfam13506 Glyco_transf_21 7.66e-04 88 178 33 120
Glycosyl transferase family 21. This is a family of ceramide beta-glucosyltransferases - EC:

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QSQ98357.1 3.83e-195 4 291 1 288
QSR12510.1 6.08e-192 4 291 1 288
QSR02204.1 6.08e-192 4 291 1 288
QSR11758.1 2.89e-190 4 291 1 288
BAV02595.1 1.07e-143 4 279 1 276

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

1.000036 0.000002 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000582_00429.