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CAZyme Information: MGYG000000584_00836

You are here: Home > Sequence: MGYG000000584_00836

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp900544195
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp900544195
CAZyme ID MGYG000000584_00836
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
742 MGYG000000584_13|CGC2 80720.27 4.9313
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000584 3056711 MAG Madagascar Africa
Gene Location Start: 30771;  End: 32999  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000584_00836.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 435 722 1.6e-33 0.7630769230769231

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 1.30e-11 444 607 199 366
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 6.69e-09 450 609 139 280
polygalacturonase
pfam13229 Beta_helix 3.76e-07 480 614 3 141
Right handed beta helix region. This region contains a parallel beta helix region that shares some similarity with Pectate lyases.
PLN02793 PLN02793 1.28e-05 452 614 145 304
Probable polygalacturonase
PLN03003 PLN03003 1.71e-05 451 607 114 259
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBL02017.1 1.03e-131 40 731 39 734
QRP58902.1 9.38e-129 4 742 16 775
QQA09745.1 9.38e-129 4 742 16 775
QQT79214.1 9.38e-129 4 742 16 775
ASW16403.1 9.38e-129 4 742 16 775

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A7PZL3 3.28e-08 444 627 168 345
Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1
Q9LW07 1.50e-06 451 607 114 259
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000285 0.266297 0.733098 0.000110 0.000102 0.000092

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000584_00836.