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CAZyme Information: MGYG000000587_00481

You are here: Home > Sequence: MGYG000000587_00481

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; ;
CAZyme ID MGYG000000587_00481
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
358 MGYG000000587_56|CGC1 41409.91 4.8372
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000587 1865333 MAG Madagascar Africa
Gene Location Start: 3579;  End: 4655  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000587_00481.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 25 355 1.1e-102 0.9728915662650602

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 1.87e-99 7 349 1 334
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 2.20e-99 3 349 7 348
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ93957.1 1.97e-142 2 354 7 360
BCJ92567.1 3.72e-141 3 355 4 356
AIQ52128.1 1.86e-138 3 355 8 360
AFC29184.1 1.51e-137 3 356 9 362
QKS45149.1 1.92e-137 3 354 14 365

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1NC5_A 1.40e-102 1 349 10 359
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 8.19e-102 2 349 1 349
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
4WU0_A 4.63e-58 6 349 3 353
StructuralAnalysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824],4WU0_B Structural Analysis of C. acetobutylicum ATCC 824 Glycoside Hydrolase From Family 105 [Clostridium acetobutylicum ATCC 824]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 7.67e-102 1 349 10 359
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
P0A3U6 1.62e-24 142 352 4 226
Protein Atu3128 OS=Agrobacterium fabrum (strain C58 / ATCC 33970) OX=176299 GN=Atu3128 PE=3 SV=1
P0A3U7 1.62e-24 142 352 4 226
24.9 kDa protein in picA locus OS=Rhizobium radiobacter OX=358 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000051 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000587_00481.