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CAZyme Information: MGYG000000604_00137

You are here: Home > Sequence: MGYG000000604_00137

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA1829 sp900549415
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp900549415
CAZyme ID MGYG000000604_00137
CAZy Family GH39
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1091 121946.62 8.9272
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000604 3604218 MAG Madagascar Africa
Gene Location Start: 157598;  End: 160873  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000604_00137.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH39 509 664 7.2e-20 0.3689095127610209

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd09621 CBM9_like_5 9.28e-25 924 1089 30 187
DOMON-like type 9 carbohydrate binding module. Family 9 carbohydrate-binding modules (CBM9) play a role in the microbial degradation of cellulose and hemicellulose (materials found in plants). The domain has previously been called cellulose-binding domain. The polysaccharide binding sites of CBMs with available 3D structure have been found to be either flat surfaces with interactions formed by predominantly aromatic residues (tryptophan and tyrosine), or extended shallow grooves. CBM9 domains found in this uncharacterized heterogeneous subfamily are often located at the C-terminus of longer proteins and may co-occur with various other functional domains such as glycosyl hydrolases. The CBM9 module in these architectures may be involved in binding to carbohydrates.
pfam01229 Glyco_hydro_39 1.36e-05 561 642 121 206
Glycosyl hydrolases family 39.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM45605.1 2.01e-151 38 1090 57 1093
AVM45582.1 3.03e-116 338 1090 23 783
BBH24554.1 1.49e-111 211 1088 248 1135
BBH20281.1 9.20e-108 214 1088 82 972
AHF94113.1 5.13e-88 340 1090 223 984

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000584 0.998667 0.000210 0.000176 0.000173 0.000166

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000604_00137.