Species | UBA1829 sp900549415 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; UBA1829; UBA1829; UBA1829 sp900549415 | |||||||||||
CAZyme ID | MGYG000000604_02306 | |||||||||||
CAZy Family | GH28 | |||||||||||
CAZyme Description | Exo-poly-alpha-D-galacturonosidase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 94833; End: 95654 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH28 | 52 | 268 | 1.3e-37 | 0.5384615384615384 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG5434 | Pgu1 | 1.25e-43 | 14 | 272 | 73 | 342 | Polygalacturonase [Carbohydrate transport and metabolism]. |
pfam12708 | Pectate_lyase_3 | 1.78e-10 | 26 | 183 | 4 | 134 | Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28. |
pfam00295 | Glyco_hydro_28 | 3.23e-08 | 128 | 247 | 61 | 168 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
PLN03003 | PLN03003 | 3.64e-07 | 20 | 247 | 20 | 218 | Probable polygalacturonase At3g15720 |
PLN02188 | PLN02188 | 5.34e-07 | 19 | 257 | 32 | 243 | polygalacturonase/glycoside hydrolase family protein |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
ALJ59324.1 | 3.20e-113 | 5 | 272 | 28 | 294 |
QHV95028.1 | 1.89e-105 | 7 | 272 | 22 | 286 |
QNH63518.1 | 6.61e-105 | 5 | 272 | 28 | 293 |
QIP13532.1 | 4.31e-104 | 7 | 272 | 22 | 286 |
ALW85269.1 | 3.68e-103 | 8 | 272 | 26 | 288 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
3JUR_A | 5.64e-36 | 15 | 266 | 19 | 287 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
5OLP_A | 2.19e-26 | 21 | 272 | 42 | 303 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
2UVE_A | 4.66e-19 | 16 | 250 | 149 | 415 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
5LW3_A | 6.58e-06 | 24 | 66 | 3 | 45 | Azotobactervinelandii Mannuronan C-5 epimerase AlgE6 A-module [Azotobacter vinelandii] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A7PZL3 | 1.60e-20 | 12 | 265 | 56 | 297 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
P15922 | 1.40e-15 | 19 | 266 | 147 | 421 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
Q9LW07 | 3.63e-08 | 20 | 247 | 20 | 218 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
Q949Z1 | 9.23e-07 | 20 | 259 | 76 | 300 | Polygalacturonase At1g48100 OS=Arabidopsis thaliana OX=3702 GN=At1g48100 PE=2 SV=1 |
P43212 | 9.57e-07 | 22 | 255 | 57 | 269 | Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000056 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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