logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000606_00220

You are here: Home > Sequence: MGYG000000606_00220

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp000433355
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp000433355
CAZyme ID MGYG000000606_00220
CAZy Family GT83
CAZyme Description Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
574 MGYG000000606_1|CGC4 63704.83 8.9344
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000606 3291011 MAG Madagascar Africa
Gene Location Start: 244944;  End: 246668  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000606_00220.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT83 20 474 6.3e-62 0.7833333333333333

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1807 ArnT 2.05e-17 22 447 13 416
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam13231 PMT_2 9.35e-05 72 220 1 147
Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366.
PRK13279 arnT 1.26e-04 19 290 11 280
lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QTO25703.1 5.67e-113 32 562 16 507
QLK84536.1 5.67e-113 32 562 16 507
QKH86812.1 3.17e-112 32 562 16 507
QUU03965.1 1.35e-107 32 521 16 472
QRP88934.1 7.50e-107 32 521 16 472

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5EZM_A 1.23e-10 37 403 52 392
CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B4EUL1 3.19e-08 16 288 8 281
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase 1 OS=Proteus mirabilis (strain HI4320) OX=529507 GN=arnT1 PE=3 SV=1
Q4ZSZ0 6.79e-07 16 401 7 362
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pseudomonas syringae pv. syringae (strain B728a) OX=205918 GN=arnT PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999999 0.000012 0.000000 0.000000 0.000000 0.000001

TMHMM  Annotations      download full data without filtering help

start end
13 35
59 81
88 110
125 144
149 167
182 204
217 239
268 290
332 351
356 373
386 408
423 445
452 474