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CAZyme Information: MGYG000000606_01376

You are here: Home > Sequence: MGYG000000606_01376

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species RC9 sp000433355
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; UBA932; RC9; RC9 sp000433355
CAZyme ID MGYG000000606_01376
CAZy Family GT5
CAZyme Description Glycogen synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
273 MGYG000000606_5|CGC5 31092.75 5.8371
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000606 3291011 MAG Madagascar Africa
Gene Location Start: 199856;  End: 200677  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000606_01376.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT5 7 226 2.9e-36 0.4427966101694915

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08323 Glyco_transf_5 2.12e-47 8 227 1 214
Starch synthase catalytic domain.
PRK14098 PRK14098 2.14e-41 1 178 1 179
starch synthase.
cd03791 GT5_Glycogen_synthase_DULL1-like 3.89e-31 7 226 1 212
Glycogen synthase GlgA and similar proteins. This family is most closely related to the GT5 family of glycosyltransferases. Glycogen synthase (EC:2.4.1.21) catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
PRK00654 glgA 8.79e-22 7 162 2 140
glycogen synthase GlgA.
COG0297 GlgA 3.48e-17 7 179 2 163
Glycogen synthase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SNV43872.1 4.03e-105 7 272 5 266
ADY34094.1 4.03e-105 7 272 5 266
AZS31272.1 1.38e-104 7 272 5 266
QRO49825.1 3.93e-104 7 272 5 266
QKG78761.1 6.81e-103 1 272 1 268

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B3EGV0 7.61e-39 7 224 7 222
Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803 / 6330) OX=290315 GN=glgA PE=3 SV=1
Q3B6C3 1.06e-38 1 227 1 236
Glycogen synthase OS=Chlorobium luteolum (strain DSM 273 / BCRC 81028 / 2530) OX=319225 GN=glgA PE=3 SV=1
B3QR00 2.80e-38 1 244 1 255
Glycogen synthase OS=Chlorobaculum parvum (strain DSM 263 / NCIMB 8327) OX=517417 GN=glgA PE=3 SV=1
B4S584 1.08e-36 1 179 1 180
Glycogen synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) OX=290512 GN=glgA PE=3 SV=1
B4SC83 1.46e-36 7 227 7 236
Glycogen synthase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) OX=324925 GN=glgA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000075 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000606_01376.