logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000625_00549

You are here: Home > Sequence: MGYG000000625_00549

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; CAG-127;
CAZyme ID MGYG000000625_00549
CAZy Family GH0
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
416 MGYG000000625_10|CGC1 46551.02 4.2667
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000625 2232283 MAG Madagascar Africa
Gene Location Start: 31475;  End: 32725  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000625_00549.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01471 PG_binding_1 2.46e-13 340 401 1 57
Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
COG3409 PGRP 2.27e-11 330 403 116 185
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
COG3409 PGRP 2.58e-09 335 401 39 102
Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis].
pfam13620 CarboxypepD_reg 0.002 15 96 6 69
Carboxypeptidase regulatory-like domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QWT53249.1 4.39e-309 1 416 5 420
QJU14725.1 1.70e-181 7 413 15 419
QQQ92685.1 1.70e-181 7 413 15 419
ASU27931.1 1.70e-181 7 413 15 419
QRT50293.1 2.25e-181 5 413 9 417

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000027 0.000010 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000625_00549.