CAZyme Information: MGYG000000633_00609

Basic Information

• Species: Victivallis sp900768515
• Lineage: Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp900768515
• CAZyme ID: MGYG000000633_00609
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
701		79721.02	6.1876

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000000633	2845403	MAG	Madagascar	Africa

• Gene Location: Start: 32156; End: 34261 Strand: -

Full Sequence      

MARFPQIRSEKSVFPSPEPGEVVQINPPSLQWVAEPGVERYRVRVESLPSEQVVAEGETV
YNFFRFRDQLEPGDYRWNVYAGEDERGWSAFTVPADAWPFRVPTAKEVLAALPENHPRHI
YFPEDLPELRERCAPELEVLKRNIALALEQGFMKYPDFWHETGRIRYRDALDEAREHFDR
NLVACALGWLFLEDRAAGEFAREAVLHICEWNPAGPASVQGPWGDEVGLSICRTLPAVFD
WTWNLYTESERLWIQRTLAQHARQIVELLGAQKFLANPGESHSGRLPGYLGEMALVLSDF
LPAETTEQYLTYVLDFYGSIFPHYGGRDGGWAEGVFYASSYTKWYLPFFLAVERLTGFSF
LCKPFYRNLSQFFLHFAPPGQEAHPFGDGHWPTRTEWPGFQAQNPFGIYADRFGPEEARR
FSRQLNSEIDRFELHLLDVIRPAAAVAHPDAAGPAMNSRVFRDTGFVSMRRCVADPKRDV
ALLARCSRYGTPSHQHADQGNFAILAGGHALIVPSGSFGYQFGEEHHRVWTMQTVAQNCI
LVDGRGQRKGSAEAVGRILEFGDDGAEATALFDLSAAYPMLKSYRRRLVFNRMLLSCKVV
DEIAAEEPVVIDWRLHSYSEPRLTGNRVVIERGTGRVEFEVNSSLGKGFRTVTDRFEYPA
GSGTGVEPKRKLLRQFHQNWQFPAAKELRITADFEVSLRVP

Enzyme Prediction     

No EC number prediction in MGYG000000633_00609.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	473	590	2.5e-24	0.8880597014925373

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	4.75e-23	15	390	11	415	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	1.50e-13	458	636	6	185	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AVM44278.1	1.62e-279	12	694	11	692
AJR05048.1	2.72e-125	14	636	13	646
AYO23963.1	2.27e-121	13	620	12	621
ANO33566.1	1.90e-118	13	630	12	634
AOM00979.1	1.25e-117	13	617	12	624

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A0O_A	4.00e-41	18	642	27	675	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	7.54e-40	18	642	27	675	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000053	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000000633_00609.