logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000000633_01198

You are here: Home > Sequence: MGYG000000633_01198

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Victivallis sp900768515
Lineage Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis sp900768515
CAZyme ID MGYG000000633_01198
CAZy Family GH42
CAZyme Description Beta-galactosidase LacZ
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
723 MGYG000000633_12|CGC1 83118.06 6.6871
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000633 2845403 MAG Madagascar Africa
Gene Location Start: 27821;  End: 29992  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000633_01198.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH42 21 397 1.5e-56 0.9757412398921833

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02449 Glyco_hydro_42 2.32e-34 26 363 12 338
Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.
COG1874 GanA 2.24e-29 4 596 14 597
Beta-galactosidase GanA [Carbohydrate transport and metabolism].
pfam08532 Glyco_hydro_42M 1.90e-13 414 587 3 185
Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.
cd03143 A4_beta-galactosidase_middle_domain 7.53e-05 434 548 23 140
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.
pfam01301 Glyco_hydro_35 0.001 26 81 26 84
Glycosyl hydrolases family 35.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVM45334.1 0.0 1 713 1 710
AHF92435.1 0.0 6 712 6 709
AKO99222.1 4.55e-48 7 603 8 608
AHF94412.1 3.44e-46 6 594 8 602
QEE26806.1 4.21e-45 5 630 57 671

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6LVW_A 1.44e-22 23 537 14 520
PolyextremophilicBeta-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi [Halorubrum lacusprofundi ATCC 49239]
6Y2K_A 4.67e-20 24 539 15 531
ChainA, beta-galactosidase [Marinomonas sp. ef1]
1KWG_A 2.07e-17 26 540 16 520
Crystalstructure of Thermus thermophilus A4 beta-galactosidase [Thermus thermophilus],1KWK_A Crystal structure of Thermus thermophilus A4 beta-galactosidase in complex with galactose [Thermus thermophilus]
5XB7_A 1.35e-14 22 529 23 521
GH42alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_B GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_C GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_D GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_E GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis],5XB7_F GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04 [Bifidobacterium animalis subsp. lactis]
6T5O_AAA 4.96e-08 8 599 33 580
ChainAAA, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T5O_BBB Chain BBB, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T5O_CCC Chain CCC, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T5O_DDD Chain DDD, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T5O_EEE Chain EEE, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T5O_FFF Chain FFF, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T6G_AAA Chain AAA, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T6G_BBB Chain BBB, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T6G_CCC Chain CCC, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T6G_DDD Chain DDD, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T6G_EEE Chain EEE, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T6G_FFF Chain FFF, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T75_AAA Chain AAA, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T75_BBB Chain BBB, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T75_CCC Chain CCC, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T75_DDD Chain DDD, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T75_EEE Chain EEE, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T75_FFF Chain FFF, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],6T7G_AAA Chain AAA, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae CL02T12C01],6T7G_BBB Chain BBB, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae CL02T12C01],6T7G_CCC Chain CCC, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae CL02T12C01],6T7G_DDD Chain DDD, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae CL02T12C01],6T7G_EEE Chain EEE, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae CL02T12C01],6T7G_FFF Chain FFF, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae CL02T12C01],7OMI_AAA Chain AAA, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMI_BBB Chain BBB, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMI_CCC Chain CCC, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMI_DDD Chain DDD, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMI_EEE Chain EEE, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMI_FFF Chain FFF, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMS_AAA Chain AAA, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMS_BBB Chain BBB, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMS_CCC Chain CCC, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMS_DDD Chain DDD, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMS_EEE Chain EEE, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae],7OMS_FFF Chain FFF, Glyco_hydro_42M domain-containing protein [Bacteroides salyersiae]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D5JGG0 1.31e-29 22 593 20 582
Beta-galactosidase LacZ OS=Weizmannia coagulans OX=1398 GN=lacZ PE=3 SV=1
C8WV58 1.32e-26 28 593 34 600
Beta-galactosidase BglY OS=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / BCRC 14685 / JCM 5260 / KCTC 1825 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 / 104-IA) OX=521098 GN=bglY PE=1 SV=1
Q5FJ41 1.50e-24 26 682 23 647
Beta-galactosidase LacZ OS=Lactobacillus acidophilus (strain ATCC 700396 / NCK56 / N2 / NCFM) OX=272621 GN=lacZ PE=1 SV=1
C6H178 3.31e-23 26 682 23 647
Beta-galactosidase LacA OS=Lactobacillus acidophilus OX=1579 GN=lacA PE=1 SV=1
B9LW38 7.87e-22 23 537 14 520
Beta-galactosidase Bga OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) OX=416348 GN=Hlac_2868 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999926 0.000122 0.000002 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000633_01198.