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CAZyme Information: MGYG000000637_00148

You are here: Home > Sequence: MGYG000000637_00148

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Proteobacteria; Alphaproteobacteria; RF32; CAG-239; CAG-495;
CAZyme ID MGYG000000637_00148
CAZy Family GT19
CAZyme Description Lipid-A-disaccharide synthase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
388 43448.85 9.4286
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000000637 1277650 MAG Madagascar Africa
Gene Location Start: 10822;  End: 11988  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000000637_00148.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT19 9 367 1e-127 0.9915254237288136

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK00025 lpxB 1.23e-154 7 387 2 376
lipid-A-disaccharide synthase; Reviewed
COG0763 LpxB 2.39e-145 7 388 2 381
Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis].
pfam02684 LpxB 2.69e-111 9 359 1 351
Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide.
TIGR00215 lpxB 1.51e-89 9 385 8 385
lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
PRK14089 PRK14089 1.69e-49 8 370 3 335
lipid-A-disaccharide synthase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIM10250.1 3.19e-166 4 387 2 385
ACI98608.1 5.16e-124 7 386 4 383
ASG20768.1 2.39e-121 9 386 8 385
ARJ65449.1 6.36e-121 7 387 6 387
CUW40282.1 9.01e-121 3 387 2 387

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5W8S_A 2.20e-67 1 385 1 380
LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)]
5W8N_A 3.10e-67 1 385 1 380
LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B6IST7 1.03e-124 7 386 4 383
Lipid-A-disaccharide synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) OX=414684 GN=lpxB PE=3 SV=1
Q2W4D7 8.72e-121 9 387 3 382
Lipid-A-disaccharide synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) OX=342108 GN=lpxB PE=3 SV=1
Q5FUA3 1.88e-93 9 386 31 405
Lipid-A-disaccharide synthase OS=Gluconobacter oxydans (strain 621H) OX=290633 GN=lpxB PE=3 SV=1
Q0BS63 1.75e-85 9 386 6 391
Lipid-A-disaccharide synthase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=lpxB PE=3 SV=1
Q89KQ7 2.36e-79 6 383 8 384
Lipid-A-disaccharide synthase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=lpxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000054 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000000637_00148.